Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.02□□□□□ -1.77
USP38Q8NB14 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP38Q8NB14 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP38Q8NB14 CCT4P2-201ENST00000233836 1548 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 RNU4-21P-201ENST00000362802 126 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 U3.20-201ENST00000390909 217 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.01□□□□□ -1.77
USP38Q8NB14 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.01□□□□□ -1.77
USP38Q8NB14 RPL17P12-201ENST00000413391 526 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 SSXP9-201ENST00000417503 292 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 CYCSP46-201ENST00000423569 204 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 RPL21P66-201ENST00000426566 466 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 RPL22P17-201ENST00000438729 315 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC010655.1-201ENST00000449336 292 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC104308.1-201ENST00000454621 333 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.01□□□□□ -1.77
USP38Q8NB14 Y_RNA.695-201ENST00000516715 107 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 RNU6-528P-201ENST00000516926 100 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC008489.1-201ENST00000524271 483 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.01□□□□□ -1.77
USP38Q8NB14 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC011611.1-201ENST00000552179 197 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.01□□□□□ -1.77
USP38Q8NB14 MIR3945-201ENST00000581853 98 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC006116.10-201ENST00000591836 581 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC006077.1-201ENST00000604746 343 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC135507.1-201ENST00000607214 561 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AL158063.1-201ENST00000615349 536 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC002550.2-201ENST00000621246 394 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.01□□□□□ -1.77
USP38Q8NB14 AC025048.6-202ENST00000627667 438 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AP003399.1-201ENST00000637534 361 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP38Q8NB14 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
USP38Q8NB14 ZNF807-201ENST00000328088 1707 ntBASIC4.01□□□□□ -1.77
USP38Q8NB14 AP001350.1-201ENST00000601906 1524 ntBASIC4□□□□□ -1.77
USP38Q8NB14 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP38Q8NB14 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
USP38Q8NB14 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4□□□□□ -1.77
USP38Q8NB14 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
USP38Q8NB14 SNORA7.2-201ENST00000364446 145 ntBASIC4□□□□□ -1.77
USP38Q8NB14 RNU6-359P-201ENST00000365466 108 ntBASIC4□□□□□ -1.77
USP38Q8NB14 RNU6-533P-201ENST00000384144 107 ntBASIC4□□□□□ -1.77
USP38Q8NB14 RNY3P10-201ENST00000384764 102 ntBASIC4□□□□□ -1.77
USP38Q8NB14 HSPE1P26-201ENST00000405341 275 ntBASIC4□□□□□ -1.77
USP38Q8NB14 BX842559.1-201ENST00000419615 532 ntBASIC4□□□□□ -1.77
USP38Q8NB14 BEND7P1-201ENST00000422058 457 ntBASIC4□□□□□ -1.77
USP38Q8NB14 MTCO2P16-201ENST00000436962 677 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4□□□□□ -1.77
USP38Q8NB14 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4□□□□□ -1.77
USP38Q8NB14 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4□□□□□ -1.77
USP38Q8NB14 RPS29P31-201ENST00000446147 164 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4□□□□□ -1.77
USP38Q8NB14 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP38Q8NB14 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP38Q8NB14 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4□□□□□ -1.77
USP38Q8NB14 MTCO3P28-201ENST00000513351 515 ntBASIC4□□□□□ -1.77
USP38Q8NB14 RNA5SP208-201ENST00000516156 78 ntBASIC4□□□□□ -1.77
USP38Q8NB14 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4□□□□□ -1.77
USP38Q8NB14 AP003497.1-201ENST00000528472 562 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4□□□□□ -1.77
USP38Q8NB14 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4□□□□□ -1.77
USP38Q8NB14 AL157394.1-201ENST00000562983 1224 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AP001981.2-201ENST00000603241 418 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AC136601.2-201ENST00000604356 474 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AC068276.1-201ENST00000605793 379 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AC080013.6-201ENST00000606185 215 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AL158211.4-201ENST00000606988 584 ntBASIC4□□□□□ -1.77
USP38Q8NB14 AC079597.1-201ENST00000624306 508 ntBASIC4□□□□□ -1.77
USP38Q8NB14 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4□□□□□ -1.77
USP38Q8NB14 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 AC007823.1-201ENST00000569932 1566 ntBASIC4□□□□□ -1.77
USP38Q8NB14 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP38Q8NB14 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.99□□□□□ -1.77
USP38Q8NB14 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.99□□□□□ -1.77
USP38Q8NB14 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.99□□□□□ -1.77
USP38Q8NB14 CEP170P1-201ENST00000502249 4587 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP38Q8NB14 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP38Q8NB14 RNU6-1155P-201ENST00000363554 107 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 RNU6-1078P-201ENST00000364522 103 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 RNU6-283P-201ENST00000364788 107 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 RNU5E-5P-201ENST00000365379 116 ntBASIC3.99□□□□□ -1.77
USP38Q8NB14 MIR135A2-201ENST00000384854 100 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms