Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX5Q8N196 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.55□□□□□ -1.52
SIX5Q8N196 AC011626.1-201ENST00000604710 562 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX5Q8N196 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.55□□□□□ -1.52
SIX5Q8N196 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SIX5Q8N196 AC005183.1-201ENST00000603687 1979 ntBASIC5.55□□□□□ -1.52
SIX5Q8N196 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.55□□□□□ -1.52
SIX5Q8N196 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
SIX5Q8N196 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SIX5Q8N196 RNU6-874P-201ENST00000362390 105 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 Y_RNA.257-201ENST00000364596 102 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 RNU6-933P-201ENST00000384424 107 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 SNORD73A-201ENST00000386062 65 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX5Q8N196 AL353997.1-201ENST00000432936 108 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AL589765.3-201ENST00000446084 462 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AL031274.1-201ENST00000450334 232 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 RPL23AP31-201ENST00000456160 467 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.54□□□□□ -1.52
SIX5Q8N196 AC069499.1-201ENST00000489433 509 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 IGLV2-34-201ENST00000490007 283 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 VN1R104P-201ENST00000505115 1009 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 ACA59.1-201ENST00000515966 143 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX5Q8N196 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX5Q8N196 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX5Q8N196 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.54□□□□□ -1.52
SIX5Q8N196 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX5Q8N196 EDDM3DP-201ENST00000554692 434 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX5Q8N196 BNIP3P5-201ENST00000562290 498 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC074050.1-201ENST00000563247 211 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AP005403.1-201ENST00000579720 229 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 MIR4273-201ENST00000582824 84 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC093227.2-201ENST00000589357 285 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC011487.3-201ENST00000593607 453 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC234771.5-201ENST00000600161 514 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC008745.1-201ENST00000604064 271 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AL160281.1-201ENST00000605307 311 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC093799.2-201ENST00000610062 578 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC107871.2-201ENST00000612894 502 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX5Q8N196 EOGT-210ENST00000615922 1931 ntBASIC5.54□□□□□ -1.52
SIX5Q8N196 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX5Q8N196 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SIX5Q8N196 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 RNVU1-6-201ENST00000364688 164 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 Y_RNA.288-201ENST00000364854 92 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SIX5Q8N196 MIR1252-201ENST00000408861 65 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 AC063979.1-201ENST00000415539 377 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 COX6B1P1-201ENST00000415962 213 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 BX276092.3-201ENST00000424182 230 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 RPS24P13-201ENST00000442520 397 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 RN7SL385P-201ENST00000468873 276 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.53□□□□□ -1.52
SIX5Q8N196 AC107222.1-201ENST00000510899 637 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 AC012400.1-201ENST00000518452 381 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 AC087369.1-201ENST00000520775 996 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.53□□□□□ -1.52
SIX5Q8N196 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.53□□□□□ -1.52
SIX5Q8N196 AL591516.1-201ENST00000611326 274 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 AL161616.1-201ENST00000611867 286 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 AC087385.3-201ENST00000620477 187 ntBASIC5.53□□□□□ -1.52
SIX5Q8N196 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX5Q8N196 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms