Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-960P-201ENST00000364056 120 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 RNY1-201ENST00000364228 113 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.237-201ENST00000364439 102 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 SNORD50B-201ENST00000364995 70 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 SNORA2.3-201ENST00000383920 135 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.577-201ENST00000384794 101 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 MIR517A-201ENST00000385001 87 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 MIR765-201ENST00000390226 114 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AL645927.1-201ENST00000396783 406 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 MIR937-201ENST00000401271 86 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AL138885.1-201ENST00000405921 675 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 RPS4XP7-201ENST00000406274 780 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC007738.1-201ENST00000413892 348 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC009127.1-201ENST00000467090 155 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 RPL7AP6-201ENST00000477943 801 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 RN7SL441P-201ENST00000492388 296 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AP006245.2-201ENST00000522004 300 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC007991.1-201ENST00000522680 631 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 HMGN2P6-201ENST00000551091 273 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 MIR4293-201ENST00000584305 78 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 PSMA6P4-201ENST00000603247 718 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 AL138889.2-201ENST00000603883 242 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 BX005214.3-202ENST00000619809 325 ntBASIC4.64□□□□□ -1.67
ATG4DQ86TL0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG4DQ86TL0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.200-201ENST00000364018 102 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RNU4-50P-201ENST00000364361 141 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.269-201ENST00000364685 89 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RNU6-715P-201ENST00000365204 103 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RNU6-214P-201ENST00000384130 107 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AL603910.2-201ENST00000407268 136 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.793-201ENST00000411222 111 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 EIF1P2-201ENST00000428233 350 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 CALM2P2-201ENST00000428512 440 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RPL12P3-201ENST00000440080 396 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RPS3AP46-201ENST00000448352 682 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AL389915.2-201ENST00000454576 441 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 SNORD121B-201ENST00000458838 81 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RN7SL443P-201ENST00000464331 290 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AC084198.1-201ENST00000477747 402 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AC110792.1-201ENST00000491826 472 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 HMGB1P21-201ENST00000502313 581 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AP002770.2-201ENST00000543613 532 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 MIR4504-201ENST00000577413 92 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AL450472.1-202ENST00000637286 180 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 AL122126.1-201ENST00000546905 1318 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG4DQ86TL0 RBPJP2-201ENST00000618187 1444 ntBASIC4.63□□□□□ -1.67
ATG4DQ86TL0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC138393.1-203ENST00000327086 343 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.84-201ENST00000363011 104 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.277-201ENST00000364754 102 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RNU6-378P-201ENST00000384324 107 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RNU6-434P-201ENST00000384376 107 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RNU6-1081P-201ENST00000384537 107 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RN7SKP114-201ENST00000410327 279 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RNU6-1203P-201ENST00000410703 110 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 RN7SKP213-201ENST00000410746 298 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.62□□□□□ -1.67
ATG4DQ86TL0 AC104333.2-201ENST00000422630 192 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms