Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 CFTRP1-201ENST00000456646 183 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 RPS15AP1-201ENST00000457423 391 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC021382.1-201ENST00000483523 359 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 HMGB1P47-201ENST00000511281 589 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC104986.1-201ENST00000517978 436 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 U6.98-201ENST00000637157 84 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC023128.2-201ENST00000420880 1223 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 RPL7P53-201ENST00000421245 739 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 RPL23AP20-201ENST00000447965 421 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AL021397.1-201ENST00000451806 248 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 HMGN1P28-201ENST00000521340 364 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC022790.1-201ENST00000522872 204 ntBASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CSMD3Q7Z407 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 RNA5SP189-201ENST00000364920 115 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 RNA5SP181-201ENST00000410246 98 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 TPMTP3-201ENST00000411928 735 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC073310.1-201ENST00000423226 1033 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 PTGES3P5-201ENST00000455109 434 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC010627.1-201ENST00000503819 1294 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 SNORA31.11-201ENST00000516528 139 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 MIR1273G-201ENST00000577677 100 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 SNORD53B-201ENST00000577887 78 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AP005137.2-201ENST00000609238 400 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 METTL21EP-201ENST00000298105 713 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 RNU4-51P-201ENST00000364206 140 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 U8.9-201ENST00000365667 134 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 BTBD10P2-201ENST00000404779 676 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AF274854.1-201ENST00000413236 615 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 RNA5SP108-201ENST00000605921 117 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 Y_RNA.68-201ENST00000362881 102 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 Y_RNA.458-201ENST00000384240 102 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 MIR1323-201ENST00000408090 73 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 snoU13.3-201ENST00000459441 104 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC012181.1-201ENST00000479895 423 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 RN7SL274P-201ENST00000492268 272 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 MTCYBP37-201ENST00000510642 1133 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AL121839.1-201ENST00000556233 1185 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 AC090751.1-201ENST00000566966 267 ntBASIC1.11□□□□□ -2.23
CSMD3Q7Z407 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 RNA5SP138-201ENST00000365098 114 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC234781.2-201ENST00000426370 994 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 TRIM60P13-201ENST00000432350 1283 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AP000873.1-201ENST00000463987 400 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC079203.1-201ENST00000487972 404 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 U73479.1-201ENST00000618062 168 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 HSPE1P26-201ENST00000405341 275 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC069277.2-201ENST00000454211 432 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC011979.1-201ENST00000472300 483 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC010265.1-201ENST00000513509 211 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AL137100.2-201ENST00000555786 315 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC098848.2-201ENST00000588023 330 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms