Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RNA5SP502-201ENST00000362694 119 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RNU6-989P-201ENST00000362756 107 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 SNORA62.3-201ENST00000365110 153 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 MIR19A-201ENST00000384878 82 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RNU6-908P-201ENST00000410160 94 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 ZNF863P-201ENST00000426746 417 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RPL23AP30-201ENST00000432419 501 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 TIMM9P1-201ENST00000436122 256 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 UBE2V1P13-201ENST00000436983 439 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RPL7P54-201ENST00000438336 674 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RPL23AP89-201ENST00000439324 255 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC010469.1-201ENST00000463864 576 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AP000873.1-201ENST00000463987 400 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 MTCO2P29-201ENST00000465212 189 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RN7SL271P-201ENST00000487601 295 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC078817.1-201ENST00000492623 435 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC069240.1-201ENST00000548774 375 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC120057.2-201ENST00000571520 271 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 MIR4429-201ENST00000580105 73 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 MIR4444-1-201ENST00000581696 74 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 MIR4444-2-201ENST00000584390 74 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC060780.3-201ENST00000589464 80 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC112230.1-201ENST00000604342 547 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC007621.1-201ENST00000604544 437 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AL035413.2-201ENST00000604801 525 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 IGHV3-29-201ENST00000604817 344 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AL451044.1-201ENST00000604867 238 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC009994.1-201ENST00000606889 253 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 MIR92B-201ENST00000607575 96 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AL354798.1-201ENST00000622505 329 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC040168.1-201ENST00000623594 991 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC009161.2-201ENST00000624626 138 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC016588.2-201ENST00000632484 3021 ntBASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf139Q6ZV77 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 RNU6-1322P-201ENST00000364309 107 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 RNU6-877P-201ENST00000383868 107 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 SNORD51-201ENST00000384320 80 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 Y_RNA.481-201ENST00000384373 102 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 PTMAP2-201ENST00000397627 327 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 RPL23AP48-201ENST00000406913 488 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 RNA5SP104-201ENST00000410989 118 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 EI24P1-201ENST00000416584 867 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ELOCP4-201ENST00000420090 333 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 GTF2IP20-201ENST00000431663 360 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 USP12PX-201ENST00000432383 1057 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 HMGB3P12-201ENST00000438745 556 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC069285.2-201ENST00000440210 275 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC091153.1-201ENST00000466297 402 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 MTCYBP18-201ENST00000501056 747 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC017037.1-201ENST00000508460 471 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC017037.2-201ENST00000513850 890 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms