Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AL445487.1-201ENST00000415694 1580 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 RNU1-94P-201ENST00000362627 173 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 Y_RNA.126-201ENST00000363382 111 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 Y_RNA.384-201ENST00000383909 102 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 RPL21P24-201ENST00000413752 448 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC007967.1-201ENST00000455422 1159 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AL590639.1-201ENST00000456484 337 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 RN7SL432P-201ENST00000484057 298 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 Y_RNA.665-201ENST00000516177 98 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 RN7SKP21-201ENST00000516503 220 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-1153P-201ENST00000516760 105 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 MTND4P7-201ENST00000523876 130 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC024619.4-201ENST00000580924 316 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC114781.5-201ENST00000615297 108 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC005086.4-201ENST00000623065 213 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC025034.2-201ENST00000623264 286 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC125257.1-201ENST00000560400 2930 ntBASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.05□□□□□ -1.6
RUFY4Q6ZNE9 AC244517.1-201ENST00000606030 2086 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-522P-201ENST00000364497 107 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 SNORD115-7-201ENST00000365306 82 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 HDGFP1-201ENST00000405943 252 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC092447.6-201ENST00000414578 210 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AL451054.2-201ENST00000420896 202 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 CALM2P2-201ENST00000428512 440 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC236972.2-201ENST00000434979 310 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AL162389.1-201ENST00000449233 177 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AL118520.1-201ENST00000450770 291 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC091153.1-201ENST00000466297 402 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 RPL21P103-201ENST00000479921 488 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 MTCO1P29-201ENST00000496868 288 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 SLC25A15P5-201ENST00000508033 253 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-1095P-201ENST00000516148 108 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 SCARNA15.1-201ENST00000516384 125 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC022882.1-201ENST00000532142 501 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 OR5B10P-201ENST00000532869 642 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC023043.4-201ENST00000612081 449 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 TUG1_2.1-201ENST00000614234 87 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 uc_338.34-201ENST00000617467 174 ntBASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RUFY4Q6ZNE9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 EOGT-210ENST00000615922 1931 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 LINC01109-201ENST00000603837 3081 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AP004289.2-201ENST00000444413 1457 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNA5SP388-201ENST00000362584 119 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU1-20P-201ENST00000363314 162 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-82P-201ENST00000363970 107 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-61P-201ENST00000365528 109 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-1013P-201ENST00000384180 107 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-837P-201ENST00000391056 108 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 SNORA57.1-201ENST00000391227 145 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RNU4-46P-201ENST00000410818 138 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AL354751.2-201ENST00000415471 210 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 UBE2FP1-201ENST00000416536 447 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RAC1P6-201ENST00000423911 575 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RPS12P10-201ENST00000427031 377 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms