Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 ZNF285B-201ENST00000561698 1767 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 Y_RNA.169-201ENST00000363745 96 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 RNU6-1035P-201ENST00000384477 107 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 RNA5SP424-201ENST00000390988 115 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 RPL17P12-201ENST00000413391 526 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.82□□□□□ -1.8
ALFQ53S48 USP9YP26-201ENST00000421008 661 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AL353777.1-201ENST00000425552 326 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.82□□□□□ -1.8
ALFQ53S48 BMI1P1-201ENST00000445879 941 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AC098826.2-201ENST00000452011 651 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 SNORA84-201ENST00000459229 133 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 RPL21P8-201ENST00000465083 535 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 LARP1BP2-201ENST00000486594 519 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.82□□□□□ -1.8
ALFQ53S48 AC010342.1-201ENST00000514047 877 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.82□□□□□ -1.8
ALFQ53S48 RNU6-928P-201ENST00000516876 104 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 TRMT10BP1-201ENST00000519377 943 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.82□□□□□ -1.8
ALFQ53S48 AC034105.3-201ENST00000565294 442 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AMZ2P1-203ENST00000565833 850 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 MTCO3P24-201ENST00000572729 782 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.82□□□□□ -1.8
ALFQ53S48 AC008277.2-201ENST00000605196 797 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AL136313.1-201ENST00000624804 202 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.82□□□□□ -1.8
ALFQ53S48 AC010149.2-201ENST00000637608 315 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ALFQ53S48 AC110774.1-201ENST00000623567 2018 ntBASIC3.82□□□□□ -1.8
ALFQ53S48 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALFQ53S48 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALFQ53S48 TNPO1P3-201ENST00000436471 2662 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 RPS4XP5-202ENST00000449995 1334 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 RNA5SP51-201ENST00000364750 119 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 SNORA73.2-201ENST00000364946 201 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.81□□□□□ -1.8
ALFQ53S48 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALFQ53S48 RNU2-33P-201ENST00000410344 192 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AC009237.5-201ENST00000414271 501 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 ELOCP17-201ENST00000414751 326 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AC018644.1-201ENST00000429934 551 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.81□□□□□ -1.8
ALFQ53S48 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.81□□□□□ -1.8
ALFQ53S48 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
ALFQ53S48 GAPDHP27-201ENST00000447427 1020 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AL133547.1-201ENST00000448546 220 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.81□□□□□ -1.8
ALFQ53S48 AC006480.1-201ENST00000449887 378 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AC092798.1-201ENST00000458542 409 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 MTCO2P6-201ENST00000463134 685 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 SETP11-201ENST00000473027 690 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.81□□□□□ -1.8
ALFQ53S48 MTND5P13-201ENST00000513046 1079 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.81□□□□□ -1.8
ALFQ53S48 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.81□□□□□ -1.8
ALFQ53S48 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.81□□□□□ -1.8
ALFQ53S48 AC090888.1-201ENST00000561335 1141 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AC006960.3-201ENST00000561845 705 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 MIR1254-2-201ENST00000579553 63 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 WISP1-OT1-201ENST00000602893 642 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ALFQ53S48 AC110801.1-201ENST00000623590 212 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 OR8B1P-202ENST00000641132 1178 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
ALFQ53S48 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
ALFQ53S48 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
ALFQ53S48 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALFQ53S48 AC103988.1-201ENST00000566382 2177 ntBASIC3.8□□□□□ -1.8
ALFQ53S48 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ALFQ53S48 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ALFQ53S48 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ALFQ53S48 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.8□□□□□ -1.8
ALFQ53S48 AC022336.2-201ENST00000568966 2538 ntBASIC3.8□□□□□ -1.8
ALFQ53S48 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ALFQ53S48 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
ALFQ53S48 AL359634.1-202ENST00000404721 284 ntBASIC3.8□□□□□ -1.8
ALFQ53S48 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
ALFQ53S48 AC006366.1-201ENST00000422002 759 ntBASIC3.8□□□□□ -1.8
ALFQ53S48 GOT2P5-201ENST00000433995 546 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms