| ATP6AP1L | Q52LC2 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RPL7P37-201 | ENST00000425095 | 738 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | EZH2P1-201 | ENST00000431167 | 291 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | FCF1P1-201 | ENST00000432690 | 571 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC024082.2-201 | ENST00000434771 | 238 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | SEPT14P24-201 | ENST00000447236 | 180 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC004924.1-201 | ENST00000480160 | 781 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RPL36AP51-201 | ENST00000487216 | 318 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | LINC01612-201 | ENST00000504509 | 469 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC090833.1-201 | ENST00000513853 | 806 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC025881.1-201 | ENST00000518851 | 512 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | OR4R2P-201 | ENST00000530815 | 597 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MIR100HG-213 | ENST00000531470 | 560 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC025281.1-201 | ENST00000567026 | 265 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | FOPNL-205 | ENST00000573429 | 646 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MIR4666A-201 | ENST00000580160 | 79 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AP005433.1-202 | ENST00000580845 | 521 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC245036.5-201 | ENST00000596330 | 847 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC090948.3-201 | ENST00000606713 | 551 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AP001521.1-201 | ENST00000609150 | 300 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC078880.5-201 | ENST00000617845 | 421 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC007998.5-201 | ENST00000622938 | 237 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | GPBP1-201 | ENST00000264779 | 1786 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC069528.2-201 | ENST00000624849 | 1991 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC099654.7-201 | ENST00000635788 | 2127 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AMY2B-208 | ENST00000610648 | 1736 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | COPS2-203 | ENST00000542928 | 1580 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RPL21P132-201 | ENST00000331267 | 462 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | FTLP6-201 | ENST00000355274 | 422 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RNU6-609P-201 | ENST00000365459 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MIR196B-201 | ENST00000384852 | 84 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AF274854.1-201 | ENST00000413236 | 615 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL137014.1-201 | ENST00000420490 | 1226 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL109741.2-201 | ENST00000455561 | 343 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | PNPLA4P1-201 | ENST00000458328 | 305 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | LINC00888-204 | ENST00000487386 | 421 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MTCO2P9-201 | ENST00000503214 | 694 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC147055.4-201 | ENST00000504399 | 745 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC109464.2-201 | ENST00000510242 | 943 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | PKIA-203 | ENST00000518467 | 588 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | TRIQK-209 | ENST00000519969 | 555 nt | APPRIS P1 TSL 4 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | CR383656.7-201 | ENST00000548164 | 174 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MIR4446-201 | ENST00000578505 | 67 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | LAMTOR5-AS1-203 | ENST00000585330 | 463 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC010127.1-205 | ENST00000595268 | 567 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL161896.1-201 | ENST00000597248 | 508 nt | TSL 4 BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | DUXAP3-201 | ENST00000603616 | 594 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC097504.2-201 | ENST00000608088 | 454 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC009812.4-201 | ENST00000569134 | 1805 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | SLC4A7-201 | ENST00000295736 | 7757 nt | APPRIS P3 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | CHORDC1-206 | ENST00000529987 | 1698 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | OR4G11P-202 | ENST00000642116 | 1414 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MUC15-204 | ENST00000527569 | 1386 nt | TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | TXLNGY-201 | ENST00000253320 | 7299 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RNU6-1066P-201 | ENST00000363573 | 105 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RFPL3S-202 | ENST00000382086 | 455 nt | APPRIS ALT2 TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MIR518C-201 | ENST00000384822 | 101 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL031679.1-201 | ENST00000400616 | 525 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL356057.2-201 | ENST00000403318 | 432 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AF241725.1-201 | ENST00000416182 | 480 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL356320.2-201 | ENST00000417263 | 507 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC079799.1-201 | ENST00000430696 | 331 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | ACBD3-AS1-201 | ENST00000440540 | 535 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC005297.2-201 | ENST00000450430 | 606 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | MRPL42P4-201 | ENST00000453267 | 443 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL391704.1-202 | ENST00000453889 | 874 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | XKRY-201 | ENST00000510392 | 1100 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC010625.1-201 | ENST00000511296 | 403 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RNU6ATAC9P-201 | ENST00000516210 | 116 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | snoZ278.1-201 | ENST00000517059 | 112 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AHI1-217 | ENST00000534469 | 680 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | SETP7-201 | ENST00000552169 | 453 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC133065.1-201 | ENST00000572017 | 575 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AP005059.2-201 | ENST00000577527 | 578 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC037487.2-201 | ENST00000581796 | 537 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | RPL23AP78-201 | ENST00000599928 | 470 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC010620.2-201 | ENST00000600135 | 313 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC013444.2-201 | ENST00000603317 | 787 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AP002826.1-201 | ENST00000608835 | 315 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL138880.2-201 | ENST00000616214 | 239 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC027309.3-201 | ENST00000623419 | 351 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AC074099.1-201 | ENST00000634100 | 679 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | U6.101-201 | ENST00000637707 | 76 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | ATP11C-201 | ENST00000327569 | 6115 nt | APPRIS P3 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| ATP6AP1L | Q52LC2 | AL512283.1-201 | ENST00000606756 | 1384 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | DBF4P1-201 | ENST00000412976 | 1892 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | RNU6-1180P-201 | ENST00000364935 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | RNU6-878P-201 | ENST00000384578 | 110 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | RNA5SP184-201 | ENST00000411071 | 108 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | ATP5F1P1-201 | ENST00000433775 | 569 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | AC234775.1-201 | ENST00000454247 | 670 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | COX7A2P2-201 | ENST00000505291 | 250 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| ATP6AP1L | Q52LC2 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.27 | □□□□□ -2.05 | | |