Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNU6-1053P-201ENST00000515930 101 ntBASIC2.3□□□□□ -2.04
RFX7Q2KHR2 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
RFX7Q2KHR2 MIR4498-201ENST00000577599 66 ntBASIC2.3□□□□□ -2.04
RFX7Q2KHR2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX7Q2KHR2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX7Q2KHR2 AC079597.1-201ENST00000624306 508 ntBASIC2.3□□□□□ -2.04
RFX7Q2KHR2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX7Q2KHR2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX7Q2KHR2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX7Q2KHR2 AL359715.4-201ENST00000606629 1436 ntBASIC2.3□□□□□ -2.04
RFX7Q2KHR2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AL139276.1-201ENST00000311910 1001 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 RNU6-629P-201ENST00000384061 103 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 RPL17P12-201ENST00000413391 526 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 MTCYBP34-201ENST00000439552 670 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 snoU13.4-201ENST00000458916 104 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 RPL5P13-201ENST00000462840 709 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AC017007.3-201ENST00000479865 435 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 MTCO3P44-201ENST00000510977 541 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 MIR4255-201ENST00000579351 72 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 MTCO2P22-201ENST00000603246 681 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX7Q2KHR2 ZNF37BP-203ENST00000452306 1352 ntBASIC2.29□□□□□ -2.04
RFX7Q2KHR2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFX7Q2KHR2 ADAM3A-203ENST00000461344 2157 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.28□□□□□ -2.04
RFX7Q2KHR2 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 SNORA1.3-201ENST00000384676 136 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 AC108667.1-201ENST00000428618 249 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 MED6P1-201ENST00000439659 713 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 AL031183.1-201ENST00000457667 207 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 AC010285.1-201ENST00000470580 392 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 AC114322.1-201ENST00000506771 926 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.28□□□□□ -2.04
RFX7Q2KHR2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX7Q2KHR2 MIR3935-201ENST00000583472 104 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 MIR4781-201ENST00000585250 76 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 U73023.1-201ENST00000603134 700 ntBASIC2.28□□□□□ -2.04
RFX7Q2KHR2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 RNU6-837P-201ENST00000391056 108 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 RPL26P37-201ENST00000411983 438 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 AL121871.1-201ENST00000443413 436 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 RPL31P53-201ENST00000457065 348 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 AC132942.1-201ENST00000486753 483 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 OR10V3P-201ENST00000525712 725 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 AC009570.1-201ENST00000609599 745 ntBASIC2.27□□□□□ -2.05
RFX7Q2KHR2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFX7Q2KHR2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 SNORA40.18-201ENST00000391200 128 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 RABEPKP1-201ENST00000440529 1026 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 RPS26P30-201ENST00000443431 335 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 AC107393.1-201ENST00000512403 346 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 COX6CP3-201ENST00000580869 223 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 AC018755.4-201ENST00000619715 454 ntBASIC2.26□□□□□ -2.05
RFX7Q2KHR2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFX7Q2KHR2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC019129.1-201ENST00000403786 261 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 MIR1287-201ENST00000408492 90 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 UBE2D3P2-201ENST00000424409 445 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC104629.2-201ENST00000468627 598 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 RPL30P14-201ENST00000482744 348 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC023424.2-201ENST00000493479 777 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX7Q2KHR2 MIR3683-201ENST00000580847 82 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AC008739.2-201ENST00000597006 317 ntBASIC2.25□□□□□ -2.05
RFX7Q2KHR2 AL590099.1-201ENST00000615276 138 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms