Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 RNU1-91P-201ENST00000364746 163 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 MTND4LP20-201ENST00000402379 270 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 NDUFB4P4-201ENST00000404822 243 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 RNA5SP80-201ENST00000410475 111 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AL030996.1-201ENST00000411430 235 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 USP12PX-201ENST00000432383 1057 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 XKRY2-201ENST00000442362 1093 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 MTATP6P7-201ENST00000453315 681 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 MTND4LP3-201ENST00000468320 276 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 RPL30P5-201ENST00000494923 336 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC023141.11-201ENST00000508864 202 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC114781.4-201ENST00000513707 639 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AP005902.1-201ENST00000521358 186 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC083923.1-201ENST00000523708 376 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 C1DP5-201ENST00000525775 383 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC106782.4-201ENST00000568264 210 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 LRRC37A5P-203ENST00000580181 585 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 MIR6132-201ENST00000622083 109 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC025034.2-201ENST00000623264 286 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 MIR7515-201ENST00000637837 67 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC046144.1-201ENST00000478559 1853 ntBASIC1.68□□□□□ -2.14
HIST1H1AQ02539 AC008568.2-201ENST00000623862 2313 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 SNORA67.4-201ENST00000384688 142 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 SNORA48.3-201ENST00000391081 134 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AL356057.1-202ENST00000402263 756 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC090774.1-201ENST00000435925 246 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC004865.1-201ENST00000442276 1003 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC092155.2-201ENST00000454675 477 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 SUMO1P1-201ENST00000497904 306 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 RNA5SP281-201ENST00000516504 135 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 RNU7-193P-201ENST00000516723 65 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 EIF4EP5-201ENST00000528228 640 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC007938.3-201ENST00000604965 623 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AC012443.1-201ENST00000605605 231 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 AP003399.1-201ENST00000637534 361 ntBASIC1.67□□□□□ -2.14
HIST1H1AQ02539 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HIST1H1AQ02539 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 RNU6-730P-201ENST00000383954 104 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 MIR221-201ENST00000385135 110 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 CIR1P3-201ENST00000405137 479 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 RPS3AP24-201ENST00000407896 734 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 FABP5P3-201ENST00000437960 408 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC025033.1-201ENST00000463883 194 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC103783.1-201ENST00000520506 373 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC074029.2-201ENST00000551045 634 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 OR4K7P-201ENST00000580232 945 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 DNAJC19P3-201ENST00000594491 331 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AL390838.2-201ENST00000602394 274 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AP000254.1-201ENST00000609934 520 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AL161423.1-201ENST00000613700 262 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC018926.3-201ENST00000618841 406 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC009831.4-201ENST00000620744 325 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 MFSD8-245ENST00000641743 948 ntBASIC1.66□□□□□ -2.14
HIST1H1AQ02539 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
HIST1H1AQ02539 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms