Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC0.98□□□□□ -2.25
HSPG2P98160 AL353770.2-201ENST00000620024 78 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.98□□□□□ -2.25
HSPG2P98160 RN7SKP101-201ENST00000411376 320 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC0.98□□□□□ -2.25
HSPG2P98160 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC0.98□□□□□ -2.25
HSPG2P98160 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
HSPG2P98160 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.98□□□□□ -2.25
HSPG2P98160 SNORA40.6-201ENST00000391153 128 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 AF274854.1-201ENST00000413236 615 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.97□□□□□ -2.25
HSPG2P98160 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.97□□□□□ -2.25
HSPG2P98160 AC234781.2-201ENST00000426370 994 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 HMGN1P28-201ENST00000521340 364 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 AC084851.1-201ENST00000529105 249 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HSPG2P98160 AC068944.2-201ENST00000610373 403 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
HSPG2P98160 HMGN2P35-201ENST00000412164 270 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 BX510359.4-201ENST00000423750 193 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 RPL34P26-201ENST00000445636 354 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 IFNWP4-201ENST00000453148 294 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 AC087854.1-201ENST00000519706 414 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 MIR3660-201ENST00000584845 100 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 AC016877.3-201ENST00000606778 504 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 MTCYBP35-201ENST00000503630 1137 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 ARL2BPP4-201ENST00000506854 471 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 SNORA31.15-201ENST00000516771 132 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 RMST_6.1-201ENST00000611980 203 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 AC025016.1-201ENST00000616746 682 ntBASIC0.97□□□□□ -2.25
HSPG2P98160 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.97□□□□□ -2.25
HSPG2P98160 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.25
HSPG2P98160 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.96□□□□□ -2.25
HSPG2P98160 AC073310.1-201ENST00000423226 1033 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.96□□□□□ -2.26
HSPG2P98160 HMGN2P18-201ENST00000450680 270 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC004223.1-201ENST00000479840 271 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 MTCYBP18-201ENST00000501056 747 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC0.96□□□□□ -2.26
HSPG2P98160 AC104986.1-201ENST00000517978 436 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.96□□□□□ -2.26
HSPG2P98160 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.96□□□□□ -2.26
HSPG2P98160 AC011712.1-201ENST00000588959 234 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC008687.2-201ENST00000597865 520 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HSPG2P98160 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.96□□□□□ -2.26
HSPG2P98160 RNU6-461P-201ENST00000364195 107 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HSPG2P98160 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC0.96□□□□□ -2.26
HSPG2P98160 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HSPG2P98160 FABP5P6-201ENST00000510588 409 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC0.96□□□□□ -2.26
HSPG2P98160 AC023825.1-201ENST00000566704 1030 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC112191.3-201ENST00000604371 277 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 VTRNA1-1-201ENST00000363120 99 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HSPG2P98160 RAD23BP2-201ENST00000416003 1207 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 CKS1BP5-201ENST00000434172 273 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
HSPG2P98160 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HSPG2P98160 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
HSPG2P98160 OR4G11P-202ENST00000642116 1414 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC106901.1-201ENST00000425086 698 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.96□□□□□ -2.26
HSPG2P98160 NEK4P1-201ENST00000433383 879 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 MTCYBP12-201ENST00000440559 1134 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 SNRPGP3-201ENST00000469405 227 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 RPL7P5-201ENST00000471472 736 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC021382.1-201ENST00000483523 359 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HSPG2P98160 VTA1P2-201ENST00000520205 911 ntBASIC0.96□□□□□ -2.26
HSPG2P98160 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.96□□□□□ -2.26
HSPG2P98160 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HSPG2P98160 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 RNA5SP457-201ENST00000363657 124 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC0.95□□□□□ -2.26
HSPG2P98160 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HSPG2P98160 RPS26P21-201ENST00000475397 348 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC0.95□□□□□ -2.26
HSPG2P98160 AC006499.2-201ENST00000513470 337 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 RNU6-405P-201ENST00000516637 110 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 RNU6-467P-201ENST00000517027 110 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HSPG2P98160 AL118496.1-201ENST00000440201 1812 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HSPG2P98160 SNORA67.6-201ENST00000391093 99 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 snoU13.3-201ENST00000459441 104 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 RPPH1-2P-201ENST00000516688 293 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.95□□□□□ -2.26
HSPG2P98160 RPL23AP78-201ENST00000599928 470 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 AL049779.4-201ENST00000604500 156 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 RNU6-84P-201ENST00000607737 102 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.95□□□□□ -2.26
HSPG2P98160 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.95□□□□□ -2.26
HSPG2P98160 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC0.95□□□□□ -2.26
HSPG2P98160 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HSPG2P98160 MIR517C-201ENST00000385103 95 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms