Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC112191.3-201ENST00000604371 277 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 STMN1P1-201ENST00000617809 440 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PRKDCP78527 MTND1P23-201ENST00000416931 372 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 MTCYBP12-201ENST00000440559 1134 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 AL021397.1-201ENST00000451806 248 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PRKDCP78527 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.14□□□□□ -2.23
PRKDCP78527 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.14□□□□□ -2.23
PRKDCP78527 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.14□□□□□ -2.23
PRKDCP78527 AC025016.1-201ENST00000616746 682 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 AC073348.1-201ENST00000623002 331 ntBASIC1.14□□□□□ -2.23
PRKDCP78527 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.14□□□□□ -2.23
PRKDCP78527 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PRKDCP78527 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.13□□□□□ -2.23
PRKDCP78527 HMGN2P18-201ENST00000450680 270 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 HMGN1P28-201ENST00000521340 364 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.13□□□□□ -2.23
PRKDCP78527 RNA5SP457-201ENST00000363657 124 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.13□□□□□ -2.23
PRKDCP78527 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.13□□□□□ -2.23
PRKDCP78527 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.13□□□□□ -2.23
PRKDCP78527 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.13□□□□□ -2.23
PRKDCP78527 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.13□□□□□ -2.23
PRKDCP78527 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
PRKDCP78527 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
PRKDCP78527 RPL5P19-201ENST00000404228 893 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 NEK4P1-201ENST00000433383 879 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 AC009474.2-201ENST00000451383 136 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 AC068135.2-201ENST00000569293 1028 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 BNIP3P4-201ENST00000604946 565 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.13□□□□□ -2.23
PRKDCP78527 MIR591-201ENST00000385290 95 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 BX510359.4-201ENST00000423750 193 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.13□□□□□ -2.23
PRKDCP78527 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.13□□□□□ -2.23
PRKDCP78527 CFTRP2-201ENST00000634304 199 ntBASIC1.13□□□□□ -2.23
PRKDCP78527 AC103710.2-202ENST00000641454 2853 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 METTL21EP-201ENST00000298105 713 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 U8.9-201ENST00000365667 134 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 BTBD10P2-201ENST00000404779 676 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 RPL17P12-201ENST00000413391 526 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 THAP5P1-201ENST00000439089 262 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AC021382.1-201ENST00000483523 359 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 RNU6-964P-201ENST00000516524 69 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 MIR502-201ENST00000606349 86 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 MIR517C-201ENST00000385103 95 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
PRKDCP78527 AC005297.2-201ENST00000450430 606 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AC243772.1-201ENST00000451620 410 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.12□□□□□ -2.23
PRKDCP78527 CYP3A137P-201ENST00000562436 69 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AL049838.1-201ENST00000563647 981 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PRKDCP78527 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.12□□□□□ -2.23
PRKDCP78527 AC006026.1-201ENST00000444025 1803 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 RPL34P26-201ENST00000445636 354 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AL583843.1-201ENST00000456070 346 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 AC021087.2-201ENST00000504656 1203 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 MIR5000-201ENST00000577717 103 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 RMST_6.1-201ENST00000611980 203 ntBASIC1.12□□□□□ -2.23
PRKDCP78527 MTND5P7-201ENST00000413558 1798 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.11□□□□□ -2.23
PRKDCP78527 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
PRKDCP78527 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.11□□□□□ -2.23
PRKDCP78527 AC073310.1-201ENST00000423226 1033 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.11□□□□□ -2.23
PRKDCP78527 RNU6-405P-201ENST00000516637 110 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 RPPH1-2P-201ENST00000516688 293 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 RNU6-467P-201ENST00000517027 110 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
PRKDCP78527 RPL31P2-201ENST00000413849 377 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.11□□□□□ -2.23
PRKDCP78527 CKS1BP5-201ENST00000434172 273 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 FABP5P5-201ENST00000515537 406 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.11□□□□□ -2.23
PRKDCP78527 AC087373.1-201ENST00000524920 491 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 AC124283.4-201ENST00000581815 456 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 MIR3660-201ENST00000584845 100 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
PRKDCP78527 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.11□□□□□ -2.23
PRKDCP78527 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PRKDCP78527 RNA5SP257-201ENST00000363023 116 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
PRKDCP78527 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.11□□□□□ -2.23
PRKDCP78527 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.11□□□□□ -2.23
PRKDCP78527 MTND5P21-201ENST00000531961 522 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.11□□□□□ -2.23
PRKDCP78527 MIR4458-201ENST00000578872 75 ntBASIC1.11□□□□□ -2.23
PRKDCP78527 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
PRKDCP78527 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 MTCO1P48-201ENST00000448024 1096 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.1□□□□□ -2.23
PRKDCP78527 SNRPGP3-201ENST00000469405 227 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms