Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL117339.2-201ENST00000430475 180 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.12□□□□□ -1.91
CX3CL1P78423 CYCSP43-201ENST00000438233 310 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC083863.1-201ENST00000438811 231 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 HSFY6P-201ENST00000445573 403 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 GAPDHP27-201ENST00000447427 1020 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 ANP32BP2-201ENST00000454525 545 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 MTCO2P29-201ENST00000465212 189 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC010631.1-201ENST00000474150 156 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC026726.1-201ENST00000512859 601 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 RN7SKP298-201ENST00000515950 94 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 RNU6-430P-201ENST00000517078 107 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC100870.1-201ENST00000522035 505 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.12□□□□□ -1.91
CX3CL1P78423 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AL391156.1-201ENST00000554965 554 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 ZNF192P1-203ENST00000565888 810 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 MIR3921-201ENST00000577308 85 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.12□□□□□ -1.91
CX3CL1P78423 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AP002826.1-201ENST00000608835 315 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC103710.2-201ENST00000609912 942 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 ZYXP1-201ENST00000617638 118 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.12□□□□□ -1.91
CX3CL1P78423 AL672296.1-201ENST00000427780 2158 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CX3CL1P78423 UBE3AP2-201ENST00000429033 2259 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 AC138915.3-201ENST00000562908 1389 ntBASIC3.12□□□□□ -1.91
CX3CL1P78423 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CL1P78423 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC066616.2-201ENST00000559334 1481 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CL1P78423 SDAD1P2-201ENST00000441308 2028 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 OR4G2P-202ENST00000641004 1759 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.11□□□□□ -1.91
CX3CL1P78423 MIR372-201ENST00000362225 67 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 RNU6-511P-201ENST00000363496 107 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CL1P78423 MIR514A1-201ENST00000385133 98 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 TXNP7-201ENST00000406296 293 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CL1P78423 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC093156.1-201ENST00000440382 670 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CL1P78423 USP9YP15-201ENST00000442391 422 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC016696.1-201ENST00000446949 318 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.11□□□□□ -1.91
CX3CL1P78423 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CX3CL1P78423 FAM60DP-201ENST00000524174 632 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 YPEL5P3-201ENST00000547227 352 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC007224.1-201ENST00000564410 144 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC120057.2-201ENST00000571520 271 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 NRBF2P1-201ENST00000587407 859 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AC079089.3-201ENST00000603094 673 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AL606490.9-201ENST00000603331 271 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AL592436.1-201ENST00000605135 558 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC090425.2-201ENST00000608818 501 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CL1P78423 AC091834.1-201ENST00000614543 472 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 AL391261.4-201ENST00000616012 481 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 SNHG22-203ENST00000617833 660 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 MIR6500-201ENST00000622700 86 ntBASIC3.11□□□□□ -1.91
CX3CL1P78423 RNA5SP196-201ENST00000625967 102 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms