Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC108032.1-201ENST00000416706 207 ntBASIC3.78□□□□□ -1.8
RAE1P78406 SNRPEP10-201ENST00000420249 274 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL139413.1-201ENST00000421309 217 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC244098.2-201ENST00000422068 99 ntBASIC3.78□□□□□ -1.8
RAE1P78406 OR2AS1P-201ENST00000427827 319 ntBASIC3.78□□□□□ -1.8
RAE1P78406 NEK4P1-201ENST00000433383 879 ntBASIC3.78□□□□□ -1.8
RAE1P78406 RPS20P5-201ENST00000434808 360 ntBASIC3.78□□□□□ -1.8
RAE1P78406 SEPT14P3-201ENST00000439401 183 ntBASIC3.78□□□□□ -1.8
RAE1P78406 HMGB1P37-201ENST00000439613 609 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.78□□□□□ -1.8
RAE1P78406 CALM1P1-201ENST00000442082 433 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL732372.2-207ENST00000445840 183 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.78□□□□□ -1.8
RAE1P78406 AC006480.1-201ENST00000449887 378 ntBASIC3.78□□□□□ -1.8
RAE1P78406 SEPT14P2-201ENST00000453405 183 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL645939.1-201ENST00000453429 797 ntBASIC3.78□□□□□ -1.8
RAE1P78406 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.78□□□□□ -1.8
RAE1P78406 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.78□□□□□ -1.8
RAE1P78406 RNU6-261P-201ENST00000459506 102 ntBASIC3.78□□□□□ -1.8
RAE1P78406 RN7SL860P-201ENST00000473738 223 ntBASIC3.78□□□□□ -1.8
RAE1P78406 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 RPS15AP36-201ENST00000492022 382 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL132838.2-201ENST00000492041 314 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 AC026726.1-201ENST00000512859 601 ntBASIC3.78□□□□□ -1.8
RAE1P78406 SEPT14P4-201ENST00000513445 186 ntBASIC3.78□□□□□ -1.8
RAE1P78406 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 FO082796.1-201ENST00000523795 183 ntBASIC3.78□□□□□ -1.8
RAE1P78406 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL121603.1-201ENST00000553815 142 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.78□□□□□ -1.8
RAE1P78406 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.78□□□□□ -1.8
RAE1P78406 AC008752.3-201ENST00000588113 712 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.78□□□□□ -1.8
RAE1P78406 XIAPP1-201ENST00000603162 600 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL034351.1-201ENST00000605288 668 ntBASIC3.78□□□□□ -1.8
RAE1P78406 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAE1P78406 AL020991.1-201ENST00000612314 373 ntBASIC3.78□□□□□ -1.8
RAE1P78406 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.78□□□□□ -1.8
RAE1P78406 TUG1_2.1-201ENST00000614234 87 ntBASIC3.78□□□□□ -1.8
RAE1P78406 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.78□□□□□ -1.8
RAE1P78406 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAE1P78406 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAE1P78406 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
RAE1P78406 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 RNU6-1158P-201ENST00000391167 107 ntBASIC3.77□□□□□ -1.81
RAE1P78406 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 RPS3AP24-201ENST00000407896 734 ntBASIC3.77□□□□□ -1.81
RAE1P78406 RN7SKP159-201ENST00000410657 292 ntBASIC3.77□□□□□ -1.81
RAE1P78406 SSXP9-201ENST00000417503 292 ntBASIC3.77□□□□□ -1.81
RAE1P78406 ZNF90P2-204ENST00000419323 1075 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AL109913.1-201ENST00000421173 514 ntBASIC3.77□□□□□ -1.81
RAE1P78406 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 AL606489.2-201ENST00000433886 234 ntBASIC3.77□□□□□ -1.81
RAE1P78406 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 AL356535.1-201ENST00000440335 398 ntBASIC3.77□□□□□ -1.81
RAE1P78406 MTCO3P45-201ENST00000443036 613 ntBASIC3.77□□□□□ -1.81
RAE1P78406 DDX3P2-201ENST00000446138 111 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 SNRPGP6-201ENST00000451124 220 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.77□□□□□ -1.81
RAE1P78406 AL356010.1-201ENST00000456364 102 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC010618.1-201ENST00000469924 477 ntBASIC3.77□□□□□ -1.81
RAE1P78406 RPS27AP1-201ENST00000475545 471 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC069499.1-201ENST00000489433 509 ntBASIC3.77□□□□□ -1.81
RAE1P78406 RNU6-358P-201ENST00000516564 75 ntBASIC3.77□□□□□ -1.81
RAE1P78406 RNU6-835P-201ENST00000516974 104 ntBASIC3.77□□□□□ -1.81
RAE1P78406 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 MRPL49P2-201ENST00000521066 465 ntBASIC3.77□□□□□ -1.81
RAE1P78406 FAM60DP-201ENST00000524174 632 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AP004371.1-201ENST00000525240 214 ntBASIC3.77□□□□□ -1.81
RAE1P78406 OR5BN1P-201ENST00000532955 829 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.77□□□□□ -1.81
RAE1P78406 AC091516.1-201ENST00000549191 703 ntBASIC3.77□□□□□ -1.81
RAE1P78406 ARL2BPP2-201ENST00000550907 489 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.77□□□□□ -1.81
RAE1P78406 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.77□□□□□ -1.81
RAE1P78406 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAE1P78406 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.77□□□□□ -1.81
RAE1P78406 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
RAE1P78406 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.77□□□□□ -1.81
RAE1P78406 AC060780.3-201ENST00000589464 80 ntBASIC3.77□□□□□ -1.81
RAE1P78406 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
RAE1P78406 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.77□□□□□ -1.81
RAE1P78406 AC243312.2-201ENST00000623340 601 ntBASIC3.77□□□□□ -1.81
RAE1P78406 MIR4275-201ENST00000636486 87 ntBASIC3.77□□□□□ -1.81
RAE1P78406 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms