Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL157392.4-201ENST00000609756 345 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 TUG1_1.1-201ENST00000610654 145 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 AL445264.1-201ENST00000621719 171 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.74□□□□□ -1.97
PKNOX1P55347 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.74□□□□□ -1.97
PKNOX1P55347 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.74□□□□□ -1.97
PKNOX1P55347 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.74□□□□□ -1.97
PKNOX1P55347 MTND5P1-201ENST00000445440 1375 ntBASIC2.74□□□□□ -1.97
PKNOX1P55347 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX1P55347 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PKNOX1P55347 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
PKNOX1P55347 Z82195.2-201ENST00000612348 18351 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 RNU6-28P-201ENST00000362378 107 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AL512633.1-201ENST00000399931 655 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 RNA5SP492-201ENST00000411330 114 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 RAP1BP1-201ENST00000412709 553 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX1P55347 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX1P55347 AC093156.1-201ENST00000440382 670 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 RPL26P6-201ENST00000440913 438 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 ARPC3P5-201ENST00000448802 534 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 BX322784.1-201ENST00000455793 1077 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX1P55347 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX1P55347 AC119751.4-201ENST00000507498 357 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.73□□□□□ -1.97
PKNOX1P55347 AC079395.1-201ENST00000510981 262 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 DEFB131D-201ENST00000526803 184 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX1P55347 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX1P55347 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.73□□□□□ -1.97
PKNOX1P55347 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.73□□□□□ -1.97
PKNOX1P55347 CYCSP2-201ENST00000558168 301 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.73□□□□□ -1.97
PKNOX1P55347 AL512347.1-201ENST00000566420 503 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 MIR4509-3-201ENST00000578671 94 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 OR4K7P-201ENST00000580232 945 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PKNOX1P55347 MIR4509-2-201ENST00000583920 94 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 DUXAP3-201ENST00000603616 594 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 RPL23AP88-201ENST00000605759 454 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 RNU4-5P-201ENST00000607255 135 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 MIR4509-1-201ENST00000618224 94 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.73□□□□□ -1.97
PKNOX1P55347 CRYM-AS1-204ENST00000637983 556 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 OR8B1P-202ENST00000641132 1178 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.73□□□□□ -1.97
PKNOX1P55347 AC091564.4-201ENST00000533934 2194 ntBASIC2.73□□□□□ -1.97
PKNOX1P55347 AC233263.6-201ENST00000631132 1963 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 RNA5SP374-201ENST00000362939 125 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 Y_RNA.234-201ENST00000364409 97 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 MIR670-201ENST00000390142 98 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.72□□□□□ -1.97
PKNOX1P55347 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AL513175.2-201ENST00000422071 443 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 TMEM167AP1-201ENST00000423409 219 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX1P55347 RPS20P5-201ENST00000434808 360 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 RPL23AP58-201ENST00000440453 469 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AL121871.1-201ENST00000443413 436 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AL672167.3-201ENST00000465951 960 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX1P55347 HSPE1P20-201ENST00000538133 289 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 DNAJC8P1-201ENST00000554535 372 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AL355836.1-201ENST00000555951 870 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AL357080.1-201ENST00000617394 239 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AC231657.1-201ENST00000624313 397 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AC116618.1-201ENST00000634617 774 ntBASIC2.72□□□□□ -1.97
PKNOX1P55347 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.72□□□□□ -1.97
PKNOX1P55347 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.72□□□□□ -1.97
PKNOX1P55347 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PKNOX1P55347 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PKNOX1P55347 FAM35BP-202ENST00000497389 3337 ntBASIC2.71□□□□□ -1.97
PKNOX1P55347 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.97
PKNOX1P55347 AC005539.1-201ENST00000443768 1479 ntBASIC2.71□□□□□ -1.97
PKNOX1P55347 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
PKNOX1P55347 AC011460.1-201ENST00000636268 1834 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 MIR422A-201ENST00000362286 90 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PKNOX1P55347 RNU6-1242P-201ENST00000391052 103 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AL138885.1-201ENST00000405921 675 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX1P55347 AC092017.2-201ENST00000427600 362 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AL512649.1-201ENST00000428997 581 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX1P55347 ATP5F1P1-201ENST00000433775 569 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 NDUFB4P6-201ENST00000436819 366 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 THAP5P1-201ENST00000439089 262 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AC112653.1-201ENST00000443851 386 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms