Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC005297.2-201ENST00000450430 606 ntBASIC2.73□□□□□ -1.97
CDH6P55285 CACYBPP2-201ENST00000453625 678 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC092798.1-201ENST00000458542 409 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC023424.2-201ENST00000493479 777 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH6P55285 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH6P55285 AC109464.2-201ENST00000510242 943 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH6P55285 AC026801.2-201ENST00000515352 425 ntBASIC2.73□□□□□ -1.97
CDH6P55285 RN7SKP132-201ENST00000516001 208 ntBASIC2.73□□□□□ -1.97
CDH6P55285 COX6CP8-201ENST00000522620 226 ntBASIC2.73□□□□□ -1.97
CDH6P55285 HSPA8P13-201ENST00000523715 472 ntBASIC2.73□□□□□ -1.97
CDH6P55285 GTF3AP2-201ENST00000557014 266 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH6P55285 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH6P55285 MIR5708-201ENST00000579723 85 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH6P55285 AC020895.1-201ENST00000595362 272 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH6P55285 AL445435.1-201ENST00000604232 665 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AL160281.1-201ENST00000605307 311 ntBASIC2.73□□□□□ -1.97
CDH6P55285 ATP1B3P1-201ENST00000605365 821 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC099785.1-201ENST00000605697 437 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC005332.6-201ENST00000613178 446 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AP000943.4-201ENST00000622912 357 ntBASIC2.73□□□□□ -1.97
CDH6P55285 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDH6P55285 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH6P55285 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDH6P55285 SNRPEP3-201ENST00000338402 276 ntBASIC2.72□□□□□ -1.97
CDH6P55285 ANKRD36P1-201ENST00000344424 659 ntBASIC2.72□□□□□ -1.97
CDH6P55285 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDH6P55285 RNU6-216P-201ENST00000363282 104 ntBASIC2.72□□□□□ -1.97
CDH6P55285 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
CDH6P55285 MTND4P13-201ENST00000402078 1023 ntBASIC2.72□□□□□ -1.97
CDH6P55285 MTATP6P27-201ENST00000416987 621 ntBASIC2.72□□□□□ -1.97
CDH6P55285 CCDC58P2-201ENST00000417131 366 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AL356320.2-201ENST00000417263 507 ntBASIC2.72□□□□□ -1.97
CDH6P55285 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDH6P55285 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH6P55285 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH6P55285 THAP5P1-201ENST00000439089 262 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC025750.2-201ENST00000442609 450 ntBASIC2.72□□□□□ -1.97
CDH6P55285 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.72□□□□□ -1.97
CDH6P55285 MTCYBP42-201ENST00000444653 1130 ntBASIC2.72□□□□□ -1.97
CDH6P55285 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH6P55285 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH6P55285 ST13P20-201ENST00000447996 1065 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC079776.3-201ENST00000450665 370 ntBASIC2.72□□□□□ -1.97
CDH6P55285 MTCO3P11-201ENST00000455103 774 ntBASIC2.72□□□□□ -1.97
CDH6P55285 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH6P55285 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH6P55285 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH6P55285 AC090453.1-201ENST00000495560 436 ntBASIC2.72□□□□□ -1.97
CDH6P55285 RAC1P5-201ENST00000512182 576 ntBASIC2.72□□□□□ -1.97
CDH6P55285 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH6P55285 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH6P55285 AC103783.1-201ENST00000520506 373 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC128657.1-201ENST00000549459 145 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC087897.1-201ENST00000550134 156 ntBASIC2.72□□□□□ -1.97
CDH6P55285 MTND4LP25-201ENST00000570218 163 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC004853.1-201ENST00000604902 698 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC007619.2-201ENST00000605743 379 ntBASIC2.72□□□□□ -1.97
CDH6P55285 BX664608.1-201ENST00000610519 487 ntBASIC2.72□□□□□ -1.97
CDH6P55285 AC090772.4-201ENST00000623599 362 ntBASIC2.72□□□□□ -1.97
CDH6P55285 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH6P55285 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH6P55285 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
CDH6P55285 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.71□□□□□ -1.97
CDH6P55285 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDH6P55285 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH6P55285 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH6P55285 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH6P55285 NDUFB4P4-201ENST00000404822 243 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 USP9YP20-201ENST00000419224 558 ntBASIC2.71□□□□□ -1.98
CDH6P55285 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH6P55285 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AC013262.1-201ENST00000426710 252 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 RPL36AP6-201ENST00000435770 321 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH6P55285 LSM1P1-201ENST00000438629 273 ntBASIC2.71□□□□□ -1.98
CDH6P55285 PTGES3P1-201ENST00000439531 483 ntBASIC2.71□□□□□ -1.98
CDH6P55285 RPL26P6-201ENST00000440913 438 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AC011816.1-201ENST00000441346 546 ntBASIC2.71□□□□□ -1.98
CDH6P55285 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH6P55285 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH6P55285 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 RNU6-798P-201ENST00000516912 103 ntBASIC2.71□□□□□ -1.98
CDH6P55285 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH6P55285 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH6P55285 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH6P55285 ACTR3BP3-201ENST00000565577 979 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AC023825.1-201ENST00000566704 1030 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH6P55285 VN1R90P-201ENST00000595717 726 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AL390838.2-201ENST00000602394 274 ntBASIC2.71□□□□□ -1.98
CDH6P55285 AL033523.1-201ENST00000605153 153 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms