Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PIGFP2-201ENST00000421400 651 ntBASIC4.12□□□□□ -1.75
COPAP53621 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.12□□□□□ -1.75
COPAP53621 AC019097.1-201ENST00000424783 735 ntBASIC4.12□□□□□ -1.75
COPAP53621 TBCAP1-201ENST00000436520 327 ntBASIC4.12□□□□□ -1.75
COPAP53621 AF228730.2-201ENST00000438784 848 ntBASIC4.12□□□□□ -1.75
COPAP53621 AL356535.1-201ENST00000440335 398 ntBASIC4.12□□□□□ -1.75
COPAP53621 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.12□□□□□ -1.75
COPAP53621 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.12□□□□□ -1.75
COPAP53621 AC004924.1-201ENST00000480160 781 ntBASIC4.12□□□□□ -1.75
COPAP53621 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.12□□□□□ -1.75
COPAP53621 RPS3AP50-201ENST00000487064 803 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC069499.1-201ENST00000489433 509 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC110792.1-201ENST00000491826 472 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC020893.1-201ENST00000502452 580 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC010587.1-201ENST00000505809 469 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC010493.1-201ENST00000513479 292 ntBASIC4.12□□□□□ -1.75
COPAP53621 RNU6-1073P-201ENST00000517182 106 ntBASIC4.12□□□□□ -1.75
COPAP53621 HMGN1P28-201ENST00000521340 364 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC109635.4-202ENST00000531666 412 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC018630.1-201ENST00000541376 925 ntBASIC4.12□□□□□ -1.75
COPAP53621 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.12□□□□□ -1.75
COPAP53621 AC120057.2-201ENST00000571520 271 ntBASIC4.12□□□□□ -1.75
COPAP53621 MIR4801-201ENST00000582704 82 ntBASIC4.12□□□□□ -1.75
COPAP53621 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.12□□□□□ -1.75
COPAP53621 KC877982.1-201ENST00000602313 470 ntBASIC4.12□□□□□ -1.75
COPAP53621 AP001429.1-201ENST00000602568 530 ntBASIC4.12□□□□□ -1.75
COPAP53621 AC068944.2-201ENST00000610373 403 ntBASIC4.12□□□□□ -1.75
COPAP53621 AL590282.1-201ENST00000610379 1136 ntBASIC4.12□□□□□ -1.75
COPAP53621 AL592295.2-201ENST00000612578 206 ntBASIC4.12□□□□□ -1.75
COPAP53621 CR381653.2-201ENST00000624041 768 ntBASIC4.12□□□□□ -1.75
COPAP53621 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
COPAP53621 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.12□□□□□ -1.75
COPAP53621 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPAP53621 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COPAP53621 OR4G2P-201ENST00000328113 903 ntBASIC4.11□□□□□ -1.75
COPAP53621 RNU5A-8P-201ENST00000364102 114 ntBASIC4.11□□□□□ -1.75
COPAP53621 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
COPAP53621 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COPAP53621 RNU6-1074P-201ENST00000383995 104 ntBASIC4.11□□□□□ -1.75
COPAP53621 RNU6-432P-201ENST00000384196 109 ntBASIC4.11□□□□□ -1.75
COPAP53621 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COPAP53621 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.11□□□□□ -1.75
COPAP53621 SSXP9-201ENST00000417503 292 ntBASIC4.11□□□□□ -1.75
COPAP53621 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.11□□□□□ -1.75
COPAP53621 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.11□□□□□ -1.75
COPAP53621 AL358472.1-201ENST00000431295 329 ntBASIC4.11□□□□□ -1.75
COPAP53621 AL445584.1-201ENST00000431451 330 ntBASIC4.11□□□□□ -1.75
COPAP53621 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.11□□□□□ -1.75
COPAP53621 AL358934.1-201ENST00000432346 324 ntBASIC4.11□□□□□ -1.75
COPAP53621 AC007389.2-201ENST00000434630 306 ntBASIC4.11□□□□□ -1.75
COPAP53621 TIMM9P1-201ENST00000436122 256 ntBASIC4.11□□□□□ -1.75
COPAP53621 SETP5-201ENST00000437270 562 ntBASIC4.11□□□□□ -1.75
COPAP53621 MTCO2P3-201ENST00000442543 421 ntBASIC4.11□□□□□ -1.75
COPAP53621 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.11□□□□□ -1.75
COPAP53621 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.11□□□□□ -1.75
COPAP53621 PSPHP1-201ENST00000450062 261 ntBASIC4.11□□□□□ -1.75
COPAP53621 RBM43P1-201ENST00000476891 1081 ntBASIC4.11□□□□□ -1.75
COPAP53621 RPL7P23-201ENST00000493874 747 ntBASIC4.11□□□□□ -1.75
COPAP53621 RPL23AP55-201ENST00000498163 452 ntBASIC4.11□□□□□ -1.75
COPAP53621 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.11□□□□□ -1.75
COPAP53621 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COPAP53621 AC108078.1-201ENST00000508073 725 ntBASIC4.11□□□□□ -1.75
COPAP53621 IGKV2-38-201ENST00000517443 247 ntBASIC4.11□□□□□ -1.75
COPAP53621 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.11□□□□□ -1.75
COPAP53621 AC063950.1-201ENST00000552036 308 ntBASIC4.11□□□□□ -1.75
COPAP53621 TPRKBP2-201ENST00000565969 475 ntBASIC4.11□□□□□ -1.75
COPAP53621 MIR5685-201ENST00000579080 79 ntBASIC4.11□□□□□ -1.75
COPAP53621 MIR4444-1-201ENST00000581696 74 ntBASIC4.11□□□□□ -1.75
COPAP53621 MIR4444-2-201ENST00000584390 74 ntBASIC4.11□□□□□ -1.75
COPAP53621 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.11□□□□□ -1.75
COPAP53621 MIR6868-201ENST00000611215 58 ntBASIC4.11□□□□□ -1.75
COPAP53621 AL138713.1-201ENST00000624026 2130 ntBASIC4.11□□□□□ -1.75
COPAP53621 AP005264.7-201ENST00000625003 745 ntBASIC4.11□□□□□ -1.75
COPAP53621 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
COPAP53621 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COPAP53621 AL365440.1-201ENST00000436135 2167 ntBASIC4.11□□□□□ -1.75
COPAP53621 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.11□□□□□ -1.75
COPAP53621 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COPAP53621 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.1□□□□□ -1.75
COPAP53621 FAM35DP-201ENST00000323387 2712 ntBASIC4.1□□□□□ -1.75
COPAP53621 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPAP53621 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPAP53621 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COPAP53621 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.1□□□□□ -1.75
COPAP53621 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.1□□□□□ -1.75
COPAP53621 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COPAP53621 SNORA60-201ENST00000362396 134 ntBASIC4.1□□□□□ -1.75
COPAP53621 RNU5E-1-201ENST00000362477 120 ntBASIC4.1□□□□□ -1.75
COPAP53621 MIR181A1-201ENST00000385026 110 ntBASIC4.1□□□□□ -1.75
COPAP53621 RNU6-278P-201ENST00000390945 109 ntBASIC4.1□□□□□ -1.75
COPAP53621 RNA5SP171-201ENST00000391071 115 ntBASIC4.1□□□□□ -1.75
COPAP53621 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.1□□□□□ -1.75
COPAP53621 AL159169.1-201ENST00000421119 127 ntBASIC4.1□□□□□ -1.75
COPAP53621 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.1□□□□□ -1.75
COPAP53621 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.1□□□□□ -1.75
COPAP53621 RPL31P35-201ENST00000431058 377 ntBASIC4.1□□□□□ -1.75
COPAP53621 AC011742.1-201ENST00000431448 434 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms