Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.57□□□□□ -2.16
CENPFP49454 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.57□□□□□ -2.16
CENPFP49454 CR383656.8-201ENST00000549046 145 ntBASIC1.57□□□□□ -2.16
CENPFP49454 OR4K8P-201ENST00000578842 1048 ntBASIC1.57□□□□□ -2.16
CENPFP49454 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CENPFP49454 AL596028.1-201ENST00000326971 197 ntBASIC1.57□□□□□ -2.16
CENPFP49454 Y_RNA.294-201ENST00000364916 102 ntBASIC1.57□□□□□ -2.16
CENPFP49454 VTRNA1-3-201ENST00000365645 89 ntBASIC1.57□□□□□ -2.16
CENPFP49454 AIMP1P2-201ENST00000425294 312 ntBASIC1.57□□□□□ -2.16
CENPFP49454 EZH2P1-201ENST00000431167 291 ntBASIC1.57□□□□□ -2.16
CENPFP49454 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.57□□□□□ -2.16
CENPFP49454 AC034268.2-201ENST00000571784 482 ntBASIC1.57□□□□□ -2.16
CENPFP49454 AC099778.2-201ENST00000610904 211 ntBASIC1.57□□□□□ -2.16
CENPFP49454 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
CENPFP49454 AL049830.2-201ENST00000480072 201 ntBASIC1.57□□□□□ -2.16
CENPFP49454 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.57□□□□□ -2.16
CENPFP49454 RNA5SP121-201ENST00000516537 101 ntBASIC1.57□□□□□ -2.16
CENPFP49454 RNU1-40P-201ENST00000516816 164 ntBASIC1.57□□□□□ -2.16
CENPFP49454 RNU1-97P-201ENST00000516872 164 ntBASIC1.57□□□□□ -2.16
CENPFP49454 AC008133.2-201ENST00000624540 351 ntBASIC1.57□□□□□ -2.16
CENPFP49454 AC073869.7-201ENST00000640874 297 ntBASIC1.57□□□□□ -2.16
CENPFP49454 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
CENPFP49454 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CENPFP49454 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CENPFP49454 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.56□□□□□ -2.16
CENPFP49454 RPL17P12-201ENST00000413391 526 ntBASIC1.56□□□□□ -2.16
CENPFP49454 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.56□□□□□ -2.16
CENPFP49454 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.56□□□□□ -2.16
CENPFP49454 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
CENPFP49454 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CENPFP49454 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CENPFP49454 Y_RNA.258-201ENST00000364613 105 ntBASIC1.56□□□□□ -2.16
CENPFP49454 DUXAP8-207ENST00000456786 622 ntBASIC1.56□□□□□ -2.16
CENPFP49454 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.56□□□□□ -2.16
CENPFP49454 RPL31P41-201ENST00000477967 372 ntBASIC1.56□□□□□ -2.16
CENPFP49454 AC104986.1-201ENST00000517978 436 ntBASIC1.56□□□□□ -2.16
CENPFP49454 CYP3A137P-201ENST00000562436 69 ntBASIC1.56□□□□□ -2.16
CENPFP49454 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CENPFP49454 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CENPFP49454 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.55□□□□□ -2.16
CENPFP49454 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.55□□□□□ -2.16
CENPFP49454 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CENPFP49454 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.55□□□□□ -2.16
CENPFP49454 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.55□□□□□ -2.16
CENPFP49454 MIR193B-201ENST00000384907 83 ntBASIC1.55□□□□□ -2.16
CENPFP49454 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.55□□□□□ -2.16
CENPFP49454 OR10R1P-201ENST00000441524 1141 ntBASIC1.55□□□□□ -2.16
CENPFP49454 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.55□□□□□ -2.16
CENPFP49454 AC008127.2-201ENST00000549925 1075 ntBASIC1.55□□□□□ -2.16
CENPFP49454 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
CENPFP49454 RNU6-492P-201ENST00000363035 104 ntBASIC1.55□□□□□ -2.16
CENPFP49454 SNORD6-201ENST00000365444 73 ntBASIC1.55□□□□□ -2.16
CENPFP49454 SNORA70.7-201ENST00000384159 133 ntBASIC1.55□□□□□ -2.16
CENPFP49454 MIR216A-201ENST00000385063 110 ntBASIC1.55□□□□□ -2.16
CENPFP49454 SEC63P1-201ENST00000425785 1258 ntBASIC1.55□□□□□ -2.16
CENPFP49454 AC098934.3-201ENST00000430450 190 ntBASIC1.55□□□□□ -2.16
CENPFP49454 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.55□□□□□ -2.16
CENPFP49454 BMI1P1-201ENST00000445879 941 ntBASIC1.55□□□□□ -2.16
CENPFP49454 RPS15AP1-201ENST00000457423 391 ntBASIC1.55□□□□□ -2.16
CENPFP49454 RNU6-1132P-201ENST00000459214 107 ntBASIC1.55□□□□□ -2.16
CENPFP49454 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.55□□□□□ -2.16
CENPFP49454 RN7SKP265-201ENST00000516448 223 ntBASIC1.55□□□□□ -2.16
CENPFP49454 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
CENPFP49454 AL449363.1-201ENST00000617815 186 ntBASIC1.55□□□□□ -2.16
CENPFP49454 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.55□□□□□ -2.16
CENPFP49454 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.54□□□□□ -2.16
CENPFP49454 AL359851.1-201ENST00000569460 4997 ntBASIC1.54□□□□□ -2.16
CENPFP49454 TPRKBP1-201ENST00000456243 481 ntBASIC1.54□□□□□ -2.16
CENPFP49454 AC105313.1-201ENST00000509121 353 ntBASIC1.54□□□□□ -2.16
CENPFP49454 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.54□□□□□ -2.16
CENPFP49454 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.54□□□□□ -2.16
CENPFP49454 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CENPFP49454 HMGB1P5-201ENST00000255320 642 ntBASIC1.54□□□□□ -2.16
CENPFP49454 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.54□□□□□ -2.16
CENPFP49454 WARS2P1-201ENST00000429678 537 ntBASIC1.54□□□□□ -2.16
CENPFP49454 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CENPFP49454 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.54□□□□□ -2.16
CENPFP49454 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.54□□□□□ -2.16
CENPFP49454 RPPH1-2P-201ENST00000516688 293 ntBASIC1.54□□□□□ -2.16
CENPFP49454 RPL23AP78-201ENST00000599928 470 ntBASIC1.54□□□□□ -2.16
CENPFP49454 RNU4-91P-201ENST00000364778 135 ntBASIC1.53□□□□□ -2.16
CENPFP49454 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
CENPFP49454 AC002524.1-201ENST00000411687 547 ntBASIC1.53□□□□□ -2.16
CENPFP49454 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.53□□□□□ -2.16
CENPFP49454 AC007560.1-201ENST00000426912 237 ntBASIC1.53□□□□□ -2.16
CENPFP49454 RPS6P15-201ENST00000431996 751 ntBASIC1.53□□□□□ -2.16
CENPFP49454 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CENPFP49454 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.53□□□□□ -2.16
CENPFP49454 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
CENPFP49454 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.53□□□□□ -2.16
CENPFP49454 AC012493.3-201ENST00000604494 112 ntBASIC1.53□□□□□ -2.16
CENPFP49454 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.53□□□□□ -2.16
CENPFP49454 MTND4P1-201ENST00000457501 1466 ntBASIC1.53□□□□□ -2.16
CENPFP49454 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CENPFP49454 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.53□□□□□ -2.16
CENPFP49454 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.53□□□□□ -2.17
CENPFP49454 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.53□□□□□ -2.17
CENPFP49454 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.53□□□□□ -2.17
CENPFP49454 AC092451.2-201ENST00000538746 658 ntBASIC1.53□□□□□ -2.17
CENPFP49454 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.53□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms