Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TVP23CP2-201ENST00000571473 623 ntBASIC4.88□□□□□ -1.63
CCNFP41002 MIR4700-201ENST00000578311 74 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNFP41002 HMGB2P1-201ENST00000591146 634 ntBASIC4.88□□□□□ -1.63
CCNFP41002 U2.17-201ENST00000611454 95 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AL450472.3-201ENST00000615578 367 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AC131238.1-201ENST00000617135 328 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AC008121.3-201ENST00000618726 433 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AC006065.5-201ENST00000623427 349 ntBASIC4.88□□□□□ -1.63
CCNFP41002 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CCNFP41002 AC025031.4-201ENST00000621248 3271 ntBASIC4.88□□□□□ -1.63
CCNFP41002 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCNFP41002 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCNFP41002 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNFP41002 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCNFP41002 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNFP41002 Y_RNA.31-201ENST00000362574 102 ntBASIC4.87□□□□□ -1.63
CCNFP41002 Y_RNA.187-201ENST00000363918 113 ntBASIC4.87□□□□□ -1.63
CCNFP41002 SNORA58B-201ENST00000364259 136 ntBASIC4.87□□□□□ -1.63
CCNFP41002 SNORA22B-201ENST00000383876 138 ntBASIC4.87□□□□□ -1.63
CCNFP41002 SPTLC1P2-201ENST00000407089 121 ntBASIC4.87□□□□□ -1.63
CCNFP41002 RNU6-712P-201ENST00000410558 100 ntBASIC4.87□□□□□ -1.63
CCNFP41002 BX682237.1-201ENST00000415016 335 ntBASIC4.87□□□□□ -1.63
CCNFP41002 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.87□□□□□ -1.63
CCNFP41002 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.87□□□□□ -1.63
CCNFP41002 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 RPL21P112-201ENST00000434403 463 ntBASIC4.87□□□□□ -1.63
CCNFP41002 FABP5P14-201ENST00000437273 393 ntBASIC4.87□□□□□ -1.63
CCNFP41002 RPL34P20-201ENST00000442771 351 ntBASIC4.87□□□□□ -1.63
CCNFP41002 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 AC091685.2-201ENST00000454924 864 ntBASIC4.87□□□□□ -1.63
CCNFP41002 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 AC021146.3-201ENST00000511911 260 ntBASIC4.87□□□□□ -1.63
CCNFP41002 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNFP41002 Y_RNA.689-201ENST00000516589 107 ntBASIC4.87□□□□□ -1.63
CCNFP41002 RNU6-685P-201ENST00000517088 95 ntBASIC4.87□□□□□ -1.63
CCNFP41002 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.87□□□□□ -1.63
CCNFP41002 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.87□□□□□ -1.63
CCNFP41002 AC022882.1-201ENST00000532142 501 ntBASIC4.87□□□□□ -1.63
CCNFP41002 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNFP41002 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNFP41002 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNFP41002 MIR5690-201ENST00000583739 73 ntBASIC4.87□□□□□ -1.63
CCNFP41002 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNFP41002 AL031320.1-201ENST00000604177 357 ntBASIC4.87□□□□□ -1.63
CCNFP41002 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNFP41002 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNFP41002 AL591926.8-201ENST00000616876 211 ntBASIC4.87□□□□□ -1.63
CCNFP41002 AC018445.2-201ENST00000622987 260 ntBASIC4.87□□□□□ -1.63
CCNFP41002 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.87□□□□□ -1.63
CCNFP41002 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNFP41002 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CCNFP41002 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNFP41002 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.87□□□□□ -1.63
CCNFP41002 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNFP41002 AC107068.1-201ENST00000563286 4218 ntBASIC4.86□□□□□ -1.63
CCNFP41002 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNFP41002 AL356489.2-201ENST00000566968 3528 ntBASIC4.86□□□□□ -1.63
CCNFP41002 Y_RNA.197-201ENST00000364004 102 ntBASIC4.86□□□□□ -1.63
CCNFP41002 RNA5SP428-201ENST00000365129 132 ntBASIC4.86□□□□□ -1.63
CCNFP41002 RNU6-601P-201ENST00000384540 107 ntBASIC4.86□□□□□ -1.63
CCNFP41002 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCNFP41002 CISD1P1-201ENST00000393907 327 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AL357515.1-201ENST00000402967 542 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNFP41002 NEFMP1-201ENST00000443423 1006 ntBASIC4.86□□□□□ -1.63
CCNFP41002 RPL32P28-201ENST00000443577 397 ntBASIC4.86□□□□□ -1.63
CCNFP41002 H2AFZP5-201ENST00000446960 382 ntBASIC4.86□□□□□ -1.63
CCNFP41002 RPS11P1-201ENST00000451072 473 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNFP41002 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.86□□□□□ -1.63
CCNFP41002 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNFP41002 DYNLL1P5-201ENST00000467158 270 ntBASIC4.86□□□□□ -1.63
CCNFP41002 RN7SL319P-201ENST00000480656 221 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNFP41002 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 AC018630.1-201ENST00000541376 925 ntBASIC4.86□□□□□ -1.63
CCNFP41002 MIR4691-201ENST00000583764 85 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AL121655.1-201ENST00000605811 308 ntBASIC4.86□□□□□ -1.63
CCNFP41002 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 AC103705.1-201ENST00000619013 241 ntBASIC4.86□□□□□ -1.63
CCNFP41002 MIR6130-201ENST00000619419 109 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AC019206.1-201ENST00000621938 425 ntBASIC4.86□□□□□ -1.63
CCNFP41002 BMS1P21-201ENST00000634565 365 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AC109780.1-201ENST00000451768 1344 ntBASIC4.86□□□□□ -1.63
CCNFP41002 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNFP41002 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNFP41002 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNFP41002 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.86□□□□□ -1.63
CCNFP41002 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCNFP41002 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNFP41002 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNFP41002 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms