Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PSMA6P3-201ENST00000428242 164 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 SETP8-201ENST00000435341 628 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 USP9YP35-201ENST00000435696 412 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 MTND5P2-201ENST00000442927 1142 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 UQCRHP3-201ENST00000451503 251 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCLP35914 RPS20P24-201ENST00000457473 361 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC146507.2-201ENST00000460608 476 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AP001992.1-205ENST00000462248 379 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 RPL27AP5-201ENST00000469428 449 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 MRPS33P3-201ENST00000513456 322 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC093677.1-201ENST00000514414 678 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 RNA5SP216-201ENST00000516111 123 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCLP35914 MRPS36P5-201ENST00000551909 298 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC135628.1-201ENST00000568867 534 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 AL353997.4-201ENST00000586196 166 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCLP35914 BNIP3P11-201ENST00000603878 563 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC106791.2-201ENST00000604680 391 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCLP35914 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC091925.2-201ENST00000625059 256 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 MAPK10-266ENST00000641066 6555 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCLP35914 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCLP35914 AC087359.1-201ENST00000508335 1740 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HMGCLP35914 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCLP35914 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCLP35914 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3□□□□□ -1.93
HMGCLP35914 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
HMGCLP35914 MIR422A-201ENST00000362286 90 ntBASIC3□□□□□ -1.93
HMGCLP35914 Y_RNA.493-201ENST00000384422 102 ntBASIC3□□□□□ -1.93
HMGCLP35914 RNU4-65P-201ENST00000410473 140 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC109780.2-201ENST00000413467 845 ntBASIC3□□□□□ -1.93
HMGCLP35914 MRPL50P2-201ENST00000416821 482 ntBASIC3□□□□□ -1.93
HMGCLP35914 RPL7P30-201ENST00000420888 709 ntBASIC3□□□□□ -1.93
HMGCLP35914 MTCO2P5-201ENST00000422621 426 ntBASIC3□□□□□ -1.93
HMGCLP35914 AL022400.1-201ENST00000423946 935 ntBASIC3□□□□□ -1.93
HMGCLP35914 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 AL590233.1-201ENST00000430017 456 ntBASIC3□□□□□ -1.93
HMGCLP35914 CETN4P-201ENST00000432407 469 ntBASIC3□□□□□ -1.93
HMGCLP35914 UBE2D3P1-201ENST00000436669 444 ntBASIC3□□□□□ -1.93
HMGCLP35914 MTCYBP34-201ENST00000439552 670 ntBASIC3□□□□□ -1.93
HMGCLP35914 MTND5P14-201ENST00000441481 1267 ntBASIC3□□□□□ -1.93
HMGCLP35914 RPS3AP12-201ENST00000443616 753 ntBASIC3□□□□□ -1.93
HMGCLP35914 EEF1E1P1-201ENST00000446998 430 ntBASIC3□□□□□ -1.93
HMGCLP35914 MTCO1P27-201ENST00000448269 226 ntBASIC3□□□□□ -1.93
HMGCLP35914 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3□□□□□ -1.93
HMGCLP35914 AC117440.1-201ENST00000474107 571 ntBASIC3□□□□□ -1.93
HMGCLP35914 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 OR2A20P-203ENST00000498397 1268 ntBASIC3□□□□□ -1.93
HMGCLP35914 LTV1P1-201ENST00000510683 1237 ntBASIC3□□□□□ -1.93
HMGCLP35914 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HMGCLP35914 AC026412.2-201ENST00000512270 1075 ntBASIC3□□□□□ -1.93
HMGCLP35914 RNU6-27P-201ENST00000516146 107 ntBASIC3□□□□□ -1.93
HMGCLP35914 RN7SKP43-201ENST00000516173 320 ntBASIC3□□□□□ -1.93
HMGCLP35914 RNA5SP468-201ENST00000516782 93 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3□□□□□ -1.93
HMGCLP35914 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3□□□□□ -1.93
HMGCLP35914 AC007536.1-201ENST00000533382 349 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3□□□□□ -1.93
HMGCLP35914 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 SETP7-201ENST00000552169 453 ntBASIC3□□□□□ -1.93
HMGCLP35914 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3□□□□□ -1.93
HMGCLP35914 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 AC012182.1-201ENST00000570133 895 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC010653.1-201ENST00000571108 881 ntBASIC3□□□□□ -1.93
HMGCLP35914 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 MIR4325-201ENST00000583049 90 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC004987.4-201ENST00000603383 338 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3□□□□□ -1.93
HMGCLP35914 AC025811.1-201ENST00000604312 472 ntBASIC3□□□□□ -1.93
HMGCLP35914 AL139344.1-201ENST00000605228 195 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC006329.2-201ENST00000611491 394 ntBASIC3□□□□□ -1.93
HMGCLP35914 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC068831.7-201ENST00000616954 363 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
HMGCLP35914 AC090617.7-201ENST00000623952 126 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms