Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXD13P35453 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXD13P35453 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXD13P35453 AL845331.3-202ENST00000562856 261 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXD13P35453 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXD13P35453 ZNF415P1-201ENST00000582279 1166 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXD13P35453 BCRP9-201ENST00000605312 388 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 Z99289.3-201ENST00000605586 594 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 AC004223.4-201ENST00000612426 332 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 AL603758.1-201ENST00000618654 241 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 AL356321.1-201ENST00000621360 228 ntBASIC3.64□□□□□ -1.83
HOXD13P35453 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXD13P35453 AC012321.1-201ENST00000561622 1588 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD13P35453 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD13P35453 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD13P35453 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD13P35453 MTND5P33-201ENST00000571250 1450 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 RNA5SP50-201ENST00000363731 107 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 RNU6-660P-201ENST00000364566 109 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 AL049545.1-201ENST00000401856 572 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 RPS27AP14-201ENST00000422868 454 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD13P35453 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AC005300.1-201ENST00000428401 373 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AL512649.1-201ENST00000428997 581 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD13P35453 NDUFB4P6-201ENST00000436819 366 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 HMGB3P11-201ENST00000440127 604 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD13P35453 PRDX3P3-201ENST00000447765 522 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AL590664.1-201ENST00000448065 339 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 RPL30P14-201ENST00000482744 348 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AC135721.1-201ENST00000497954 479 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD13P35453 RPL12P22-201ENST00000519073 490 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXD13P35453 MIR4307-201ENST00000582802 84 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 ELOCP35-201ENST00000604289 336 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AC013476.2-201ENST00000614456 459 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 MIR7975-201ENST00000619350 68 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXD13P35453 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD13P35453 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD13P35453 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD13P35453 FAM35BP-202ENST00000497389 3337 ntBASIC3.63□□□□□ -1.83
HOXD13P35453 TPTE2P4-201ENST00000258589 1605 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AL138713.1-201ENST00000624026 2130 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 CCT4P2-201ENST00000233836 1548 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 RNU6-500P-201ENST00000362349 107 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD13P35453 SNORA36C-201ENST00000384289 132 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 RNA5SP171-201ENST00000391071 115 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD13P35453 AC063979.1-201ENST00000415539 377 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 NDUFB4P7-201ENST00000423198 363 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD13P35453 RPS6P15-201ENST00000431996 751 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 RPL37P21-201ENST00000435890 276 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 TPT1P14-201ENST00000448018 505 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AL162389.1-201ENST00000449233 177 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD13P35453 AL359385.1-201ENST00000456509 365 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 AC091153.1-201ENST00000466297 402 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AL049874.1-201ENST00000489560 388 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 RPL21P129-201ENST00000491732 478 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 MRPS33P3-201ENST00000513456 322 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD13P35453 OR4T1P-201ENST00000554933 911 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AL355836.1-201ENST00000555951 870 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD13P35453 AC145350.1-201ENST00000567426 208 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD13P35453 MTCYBP22-201ENST00000603788 447 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 TUG1_2.1-201ENST00000614234 87 ntBASIC3.62□□□□□ -1.83
HOXD13P35453 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXD13P35453 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXD13P35453 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
HOXD13P35453 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD13P35453 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms