Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD12P35452 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD12P35452 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXD12P35452 RPL23AP87-202ENST00000573039 466 ntBASIC4.04□□□□□ -1.76
HOXD12P35452 RNU6-87P-201ENST00000607561 108 ntBASIC4.04□□□□□ -1.76
HOXD12P35452 AL596245.1-201ENST00000618994 362 ntBASIC4.04□□□□□ -1.76
HOXD12P35452 AC015967.1-201ENST00000619893 476 ntBASIC4.04□□□□□ -1.76
HOXD12P35452 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD12P35452 AC019278.1-201ENST00000623516 479 ntBASIC4.04□□□□□ -1.76
HOXD12P35452 AC010149.2-201ENST00000637608 315 ntBASIC4.04□□□□□ -1.76
HOXD12P35452 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD12P35452 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD12P35452 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD12P35452 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HOXD12P35452 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXD12P35452 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HOXD12P35452 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD12P35452 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXD12P35452 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD12P35452 RNA5SP124-201ENST00000362739 110 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 RNU6-97P-201ENST00000363387 104 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 Y_RNA.296-201ENST00000364930 108 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 MIR483-201ENST00000385070 76 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 RN7SKP156-201ENST00000410308 342 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC078974.1-201ENST00000411597 223 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC245052.5-201ENST00000416320 649 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD12P35452 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 ARPC3P1-201ENST00000437218 533 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD12P35452 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 RPL7P49-201ENST00000471402 708 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC004924.1-201ENST00000480160 781 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD12P35452 RPL29P14-201ENST00000495837 428 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 Y_RNA.672-201ENST00000516289 104 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 RNU6-201P-201ENST00000517100 61 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 RNU6-1231P-201ENST00000517185 103 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 NARSP2-201ENST00000518524 679 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 SNRPGP16-201ENST00000533275 226 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD12P35452 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD12P35452 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXD12P35452 ZNF519P2-201ENST00000557032 169 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 TPRKBP2-201ENST00000565969 475 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC034268.2-201ENST00000571784 482 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD12P35452 AL031176.1-201ENST00000604554 466 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AP000860.1-201ENST00000605250 559 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AL158209.2-201ENST00000619266 216 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AF117829.1-206ENST00000621883 3802 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 AC068880.5-201ENST00000624331 290 ntBASIC4.03□□□□□ -1.76
HOXD12P35452 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXD12P35452 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD12P35452 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD12P35452 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXD12P35452 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD12P35452 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD12P35452 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXD12P35452 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.03□□□□□ -1.77
HOXD12P35452 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HOXD12P35452 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD12P35452 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD12P35452 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
HOXD12P35452 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HOXD12P35452 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 GNG5P1-201ENST00000255500 204 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 FRG1BP-201ENST00000278882 761 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD12P35452 SNORD66.1-201ENST00000391230 76 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXD12P35452 AC127526.1-201ENST00000417526 366 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 USP9YP36-201ENST00000424581 829 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 ISCA1P1-201ENST00000426679 387 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 EZH2P1-201ENST00000431167 291 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD12P35452 MTND3P21-201ENST00000433774 331 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD12P35452 RPS3AP12-201ENST00000443616 753 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 MTCO3P20-201ENST00000454926 688 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 RPL23AP31-201ENST00000456160 467 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AP1S2P1-201ENST00000457344 379 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD12P35452 AC105914.1-201ENST00000511798 226 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AC011352.1-201ENST00000512300 793 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 SNORA31.8-201ENST00000516327 108 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AC022616.6-201ENST00000520479 119 ntBASIC4.02□□□□□ -1.77
HOXD12P35452 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD12P35452 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD12P35452 CCNG2P1-201ENST00000549521 1000 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms