Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 MIR5186-201ENST00000577504 120 ntBASIC3.08□□□□□ -1.92
SHC1P29353 MIR4637-201ENST00000582405 84 ntBASIC3.08□□□□□ -1.92
SHC1P29353 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 BNIP3P11-201ENST00000603878 563 ntBASIC3.08□□□□□ -1.92
SHC1P29353 HMGN2P28-201ENST00000606102 262 ntBASIC3.08□□□□□ -1.92
SHC1P29353 AC006566.1-201ENST00000608943 513 ntBASIC3.08□□□□□ -1.92
SHC1P29353 AC015967.1-201ENST00000619893 476 ntBASIC3.08□□□□□ -1.92
SHC1P29353 U6.101-201ENST00000637707 76 ntBASIC3.08□□□□□ -1.92
SHC1P29353 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SHC1P29353 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 AP002907.1-201ENST00000606361 1430 ntBASIC3.08□□□□□ -1.92
SHC1P29353 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.08□□□□□ -1.92
SHC1P29353 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 MFSD8-233ENST00000641482 4860 ntBASIC3.08□□□□□ -1.92
SHC1P29353 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 RNA5SP50-201ENST00000363731 107 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RNU5E-5P-201ENST00000365379 116 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
SHC1P29353 SNORA51.6-201ENST00000384151 125 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RNU6-952P-201ENST00000391164 108 ntBASIC3.07□□□□□ -1.92
SHC1P29353 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 AL078595.1-201ENST00000404458 226 ntBASIC3.07□□□□□ -1.92
SHC1P29353 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.07□□□□□ -1.92
SHC1P29353 RNA5SP293-201ENST00000410527 113 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RNU2-37P-201ENST00000410695 177 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.07□□□□□ -1.92
SHC1P29353 RPL17P12-201ENST00000413391 526 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 MTCYBP24-201ENST00000420387 1106 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RPS27AP14-201ENST00000422868 454 ntBASIC3.07□□□□□ -1.92
SHC1P29353 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 AL445669.1-201ENST00000426743 755 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RPL23AP82-202ENST00000427528 469 ntBASIC3.07□□□□□ -1.92
SHC1P29353 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 RPL37P21-201ENST00000435890 276 ntBASIC3.07□□□□□ -1.92
SHC1P29353 PRDX3P3-201ENST00000447765 522 ntBASIC3.07□□□□□ -1.92
SHC1P29353 NPM1P49-201ENST00000448027 714 ntBASIC3.07□□□□□ -1.92
SHC1P29353 NANOGNBP1-201ENST00000448444 480 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.07□□□□□ -1.92
SHC1P29353 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.07□□□□□ -1.92
SHC1P29353 CYCSP35-201ENST00000451978 304 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.07□□□□□ -1.92
SHC1P29353 CENPBD1P1-201ENST00000464061 469 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RPS15AP17-201ENST00000470598 390 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.07□□□□□ -1.92
SHC1P29353 MTND4LP26-201ENST00000518144 282 ntBASIC3.07□□□□□ -1.92
SHC1P29353 OR5D17P-201ENST00000531492 978 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AP004247.1-201ENST00000531556 1289 ntBASIC3.07□□□□□ -1.92
SHC1P29353 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.07□□□□□ -1.92
SHC1P29353 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.07□□□□□ -1.92
SHC1P29353 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.07□□□□□ -1.92
SHC1P29353 AC009063.1-201ENST00000563342 702 ntBASIC3.07□□□□□ -1.92
SHC1P29353 MIR544B-201ENST00000582372 78 ntBASIC3.07□□□□□ -1.92
SHC1P29353 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 SEPT7P9-203ENST00000604116 343 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC068944.2-201ENST00000610373 403 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC138749.5-201ENST00000611461 208 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AL589743.7-201ENST00000612637 233 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC116165.2-201ENST00000616705 206 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC104010.1-201ENST00000616889 150 ntBASIC3.07□□□□□ -1.92
SHC1P29353 U73479.1-201ENST00000618062 168 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AC012314.7-201ENST00000619693 93 ntBASIC3.07□□□□□ -1.92
SHC1P29353 AL160394.1-201ENST00000624765 724 ntBASIC3.07□□□□□ -1.92
SHC1P29353 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHC1P29353 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SHC1P29353 AL133383.2-201ENST00000622958 2336 ntBASIC3.07□□□□□ -1.92
SHC1P29353 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 Y_RNA.6-201ENST00000362350 114 ntBASIC3.06□□□□□ -1.92
SHC1P29353 RNU6-289P-201ENST00000364093 107 ntBASIC3.06□□□□□ -1.92
SHC1P29353 RNU6-259P-201ENST00000383999 107 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC016769.3-201ENST00000396562 315 ntBASIC3.06□□□□□ -1.92
SHC1P29353 GABPAP-201ENST00000419271 1356 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC245291.1-201ENST00000419501 328 ntBASIC3.06□□□□□ -1.92
SHC1P29353 RPL21P32-201ENST00000419877 477 ntBASIC3.06□□□□□ -1.92
SHC1P29353 OFD1P18Y-201ENST00000420889 959 ntBASIC3.06□□□□□ -1.92
SHC1P29353 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.06□□□□□ -1.92
SHC1P29353 AL356583.2-201ENST00000426536 280 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.06□□□□□ -1.92
SHC1P29353 BX890604.2-201ENST00000427883 474 ntBASIC3.06□□□□□ -1.92
SHC1P29353 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.06□□□□□ -1.92
SHC1P29353 MTND5P14-201ENST00000441481 1267 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms