Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 LSM1P1-201ENST00000438629 273 ntBASIC2.84□□□□□ -1.95
SDC1P18827 SNORD121B-201ENST00000458838 81 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AC017015.1-201ENST00000477387 286 ntBASIC2.84□□□□□ -1.95
SDC1P18827 RPS29P2-201ENST00000479278 136 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AC108860.1-201ENST00000484521 383 ntBASIC2.84□□□□□ -1.95
SDC1P18827 MTND4LP22-201ENST00000508209 276 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AC093809.1-201ENST00000509155 340 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 AC034159.1-201ENST00000513885 583 ntBASIC2.84□□□□□ -1.95
SDC1P18827 RNU1-61P-201ENST00000516107 151 ntBASIC2.84□□□□□ -1.95
SDC1P18827 RNA5SP216-201ENST00000516111 123 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.84□□□□□ -1.95
SDC1P18827 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SDC1P18827 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.84□□□□□ -1.95
SDC1P18827 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 COX6CP3-201ENST00000580869 223 ntBASIC2.84□□□□□ -1.95
SDC1P18827 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 MIR4999-201ENST00000585029 91 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.84□□□□□ -1.95
SDC1P18827 VIS1.1-201ENST00000610517 203 ntBASIC2.84□□□□□ -1.95
SDC1P18827 AL450472.3-201ENST00000615578 367 ntBASIC2.84□□□□□ -1.95
SDC1P18827 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SDC1P18827 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.84□□□□□ -1.95
SDC1P18827 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
SDC1P18827 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.84□□□□□ -1.95
SDC1P18827 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SDC1P18827 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.84□□□□□ -1.96
SDC1P18827 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.84□□□□□ -1.96
SDC1P18827 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
SDC1P18827 AC092447.10-201ENST00000620607 1652 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AP000568.1-201ENST00000282964 442 ntBASIC2.83□□□□□ -1.96
SDC1P18827 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 RNU6-97P-201ENST00000363387 104 ntBASIC2.83□□□□□ -1.96
SDC1P18827 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 RNU6-723P-201ENST00000383973 107 ntBASIC2.83□□□□□ -1.96
SDC1P18827 RNVU1-14-201ENST00000384770 164 ntBASIC2.83□□□□□ -1.96
SDC1P18827 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SDC1P18827 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AL591034.1-201ENST00000407447 340 ntBASIC2.83□□□□□ -1.96
SDC1P18827 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC1P18827 RN7SKP58-201ENST00000411010 305 ntBASIC2.83□□□□□ -1.96
SDC1P18827 CCDC58P2-201ENST00000417131 366 ntBASIC2.83□□□□□ -1.96
SDC1P18827 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.83□□□□□ -1.96
SDC1P18827 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC1P18827 AL158156.1-201ENST00000422509 473 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC1P18827 YWHAZP7-201ENST00000436906 631 ntBASIC2.83□□□□□ -1.96
SDC1P18827 THAP5P1-201ENST00000439089 262 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC1P18827 AP000542.1-201ENST00000448473 371 ntBASIC2.83□□□□□ -1.96
SDC1P18827 PAXBP1P1-201ENST00000449315 447 ntBASIC2.83□□□□□ -1.96
SDC1P18827 SSXP4-201ENST00000451349 245 ntBASIC2.83□□□□□ -1.96
SDC1P18827 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC1P18827 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC1P18827 AL109741.2-201ENST00000455561 343 ntBASIC2.83□□□□□ -1.96
SDC1P18827 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AL672167.3-201ENST00000465951 960 ntBASIC2.83□□□□□ -1.96
SDC1P18827 RPS26P21-201ENST00000475397 348 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC021382.1-201ENST00000483523 359 ntBASIC2.83□□□□□ -1.96
SDC1P18827 RN7SL504P-201ENST00000494496 287 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC109464.2-201ENST00000510242 943 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC022483.1-201ENST00000514020 567 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC1P18827 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC1P18827 OR7K1P-201ENST00000546439 926 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.83□□□□□ -1.96
SDC1P18827 AL391156.1-201ENST00000554965 554 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.83□□□□□ -1.96
SDC1P18827 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.83□□□□□ -1.96
SDC1P18827 AC034268.2-201ENST00000571784 482 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC136618.2-201ENST00000575091 400 ntBASIC2.83□□□□□ -1.96
SDC1P18827 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC083760.1-201ENST00000589621 670 ntBASIC2.83□□□□□ -1.96
SDC1P18827 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC1P18827 VN1R90P-201ENST00000595717 726 ntBASIC2.83□□□□□ -1.96
SDC1P18827 VN1R92P-201ENST00000598511 928 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC006539.2-201ENST00000601729 572 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AP001429.1-201ENST00000602568 530 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC013444.2-201ENST00000603317 787 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC011451.2-201ENST00000604303 598 ntBASIC2.83□□□□□ -1.96
SDC1P18827 RNU6-88P-201ENST00000606801 100 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC004832.5-201ENST00000608677 401 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AL355816.2-201ENST00000610049 647 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.83□□□□□ -1.96
SDC1P18827 AL390240.1-201ENST00000612950 384 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AC012314.7-201ENST00000619693 93 ntBASIC2.83□□□□□ -1.96
SDC1P18827 AP002791.1-201ENST00000623291 381 ntBASIC2.83□□□□□ -1.96
SDC1P18827 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SDC1P18827 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SDC1P18827 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDC1P18827 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SDC1P18827 MTND5P7-201ENST00000413558 1798 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms