Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OR4K11P-201ENST00000431829 904 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 LSM1P1-201ENST00000438629 273 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.38□□□□□ -1.87
PDGFRAP16234 RPS3AP12-201ENST00000443616 753 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC112653.1-201ENST00000443851 386 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AL591719.1-201ENST00000444669 744 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 RN7SL807P-201ENST00000470923 297 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFRAP16234 HSPE1P23-201ENST00000509838 286 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AL359273.1-201ENST00000510918 627 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 SNORA31.22-201ENST00000517204 135 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 SNORA70.24-201ENST00000517233 118 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC022690.1-201ENST00000526681 550 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AP003461.1-201ENST00000528866 78 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC023538.1-201ENST00000534576 736 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 OR7K1P-201ENST00000546439 926 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AC125611.2-201ENST00000551907 647 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC090888.2-201ENST00000559765 1144 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFRAP16234 MIR5195-201ENST00000583555 115 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
PDGFRAP16234 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFRAP16234 CKS1BP3-201ENST00000600888 237 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC093424.1-201ENST00000604999 338 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AC009570.1-201ENST00000609599 745 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC079395.3-201ENST00000615161 484 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AL607023.1-201ENST00000620045 248 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AL356596.1-201ENST00000624230 379 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC007490.1-201ENST00000624321 703 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 MIR3651-201ENST00000630427 90 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC008993.2-201ENST00000631744 806 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AP000526.1-201ENST00000603308 1388 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDGFRAP16234 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFRAP16234 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC093010.3-201ENST00000570269 15214 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 SNORA38.1-201ENST00000364172 131 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 RNA5SP88-201ENST00000365560 109 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 RNU6-1200P-201ENST00000384162 107 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC119751.3-201ENST00000399720 670 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 TPMTP3-201ENST00000411928 735 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFRAP16234 MRPL50P2-201ENST00000416821 482 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 PPP1R11P2-201ENST00000423543 382 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC233728.2-201ENST00000425348 757 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 UBE2V1P13-201ENST00000436983 439 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 RSU1P2-202ENST00000437884 485 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AL354941.1-201ENST00000438600 464 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AL606662.1-201ENST00000445763 553 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 Z75741.1-201ENST00000446793 314 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AL592447.1-201ENST00000447592 540 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AP000542.1-201ENST00000448473 371 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC034222.1-201ENST00000494052 532 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC118282.1-201ENST00000506408 765 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC026801.2-201ENST00000515352 425 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFRAP16234 ERHP1-201ENST00000523006 310 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 SETP2-201ENST00000553886 926 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 MIR5680-201ENST00000577577 84 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 MIR2682-201ENST00000580305 110 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC021171.1-201ENST00000603137 706 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFRAP16234 AC002076.2-201ENST00000617362 122 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFRAP16234 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFRAP16234 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFRAP16234 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.37□□□□□ -1.87
PDGFRAP16234 CUL1P1-201ENST00000509510 2425 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 AC005832.2-201ENST00000538921 1430 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFRAP16234 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PDGFRAP16234 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFRAP16234 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFRAP16234 RNU6-114P-201ENST00000384704 105 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 MIR491-201ENST00000384877 84 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 MIR493-201ENST00000385254 89 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 MIR1305-201ENST00000408300 86 ntBASIC3.36□□□□□ -1.87
PDGFRAP16234 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms