Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC005014.3-201ENST00000605985 190 ntBASIC2.08□□□□□ -2.08
COL11A1P12107 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL11A1P12107 UBE2V1P15-201ENST00000407776 448 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 MORF4L1P7-201ENST00000426038 703 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 OR51AB1P-201ENST00000429046 620 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 MTCO3P43-201ENST00000440974 771 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 RPL23AP20-201ENST00000447965 421 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC090515.1-201ENST00000465295 476 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.07□□□□□ -2.08
COL11A1P12107 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.07□□□□□ -2.08
COL11A1P12107 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AL136520.1-202ENST00000555494 763 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC090751.1-201ENST00000566966 267 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AL359821.1-201ENST00000605519 182 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC242628.1-201ENST00000606810 391 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 U6.48-201ENST00000618523 106 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC020923.1-201ENST00000624021 917 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AL121594.5-201ENST00000631724 573 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 KPNA2P1-201ENST00000458289 1591 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL11A1P12107 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AP000567.1-201ENST00000406413 156 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC092638.1-201ENST00000411966 1275 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.07□□□□□ -2.08
COL11A1P12107 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC017099.1-201ENST00000448261 1028 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 ARPC3P2-201ENST00000457786 533 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.07□□□□□ -2.08
COL11A1P12107 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL11A1P12107 MIR3683-201ENST00000580847 82 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.07□□□□□ -2.08
COL11A1P12107 AC092474.3-201ENST00000603022 568 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 HMGN2P28-201ENST00000606102 262 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 AL110115.1-201ENST00000614396 364 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 CKAP2P1-201ENST00000555477 2049 ntBASIC2.07□□□□□ -2.08
COL11A1P12107 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
COL11A1P12107 TOMM22P1-201ENST00000418578 312 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.06□□□□□ -2.08
COL11A1P12107 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.06□□□□□ -2.08
COL11A1P12107 ELOCP13-201ENST00000443934 329 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 AC009237.8-201ENST00000445492 379 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
COL11A1P12107 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.06□□□□□ -2.08
COL11A1P12107 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.06□□□□□ -2.08
COL11A1P12107 AC107393.1-201ENST00000512403 346 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.06□□□□□ -2.08
COL11A1P12107 RNU1-61P-201ENST00000516107 151 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 RNU6-467P-201ENST00000517027 110 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL11A1P12107 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.06□□□□□ -2.08
COL11A1P12107 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.06□□□□□ -2.08
COL11A1P12107 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.06□□□□□ -2.08
COL11A1P12107 MIR6864-201ENST00000617935 70 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 AC091046.2-201ENST00000620775 665 ntBASIC2.06□□□□□ -2.08
COL11A1P12107 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL11A1P12107 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.06□□□□□ -2.08
COL11A1P12107 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL11A1P12107 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.06□□□□□ -2.08
COL11A1P12107 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL11A1P12107 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
COL11A1P12107 MIR518E-201ENST00000385252 88 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AL138880.1-201ENST00000405824 642 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.05□□□□□ -2.08
COL11A1P12107 AC241520.1-201ENST00000422654 1099 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 UBE2V1P6-201ENST00000430840 422 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.05□□□□□ -2.08
COL11A1P12107 SNRPGP9-201ENST00000456025 225 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC010301.1-201ENST00000473936 355 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 MTCO1P31-201ENST00000506355 492 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 RNU6-250P-201ENST00000516958 103 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.05□□□□□ -2.08
COL11A1P12107 AC233266.2-201ENST00000567067 528 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.05□□□□□ -2.08
COL11A1P12107 AC024560.3-201ENST00000608482 349 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AL356094.1-201ENST00000624663 1212 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL11A1P12107 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
COL11A1P12107 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
COL11A1P12107 MTND4P1-201ENST00000457501 1466 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 UBE2L2-201ENST00000254302 429 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.05□□□□□ -2.08
COL11A1P12107 SNORD51.1-201ENST00000365405 77 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL11A1P12107 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.05□□□□□ -2.08
COL11A1P12107 RNU6-31P-201ENST00000384388 108 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 RNU6-185P-201ENST00000384421 107 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 RNU2-17P-201ENST00000410290 190 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 XKRYP4-201ENST00000414395 483 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms