Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HMGB1P45-201ENST00000435986 653 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 RPL21P131-201ENST00000497298 483 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.42□□□□□ -2.02
TOP2AP11388 AP000790.1-201ENST00000528891 737 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.42□□□□□ -2.02
TOP2AP11388 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.42□□□□□ -2.02
TOP2AP11388 AL354943.1-201ENST00000572103 781 ntBASIC2.42□□□□□ -2.02
TOP2AP11388 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.42□□□□□ -2.02
TOP2AP11388 AC008427.1-201ENST00000503102 655 ntBASIC2.41□□□□□ -2.02
TOP2AP11388 RNA5SP480-201ENST00000516840 109 ntBASIC2.41□□□□□ -2.02
TOP2AP11388 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.41□□□□□ -2.02
TOP2AP11388 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TOP2AP11388 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TOP2AP11388 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
TOP2AP11388 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TOP2AP11388 RNU6-461P-201ENST00000364195 107 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AL590084.1-201ENST00000407885 387 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AL512661.1-201ENST00000434586 1253 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 OR10R1P-201ENST00000441524 1141 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AC009238.1-201ENST00000442165 424 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AC009237.6-201ENST00000446969 424 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AL121594.1-201ENST00000475906 575 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.4□□□□□ -2.03
TOP2AP11388 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP2AP11388 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP2AP11388 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.4□□□□□ -2.03
TOP2AP11388 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.4□□□□□ -2.03
TOP2AP11388 BNIP3P4-201ENST00000604946 565 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AC007620.3-201ENST00000608131 497 ntBASIC2.4□□□□□ -2.03
TOP2AP11388 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP2AP11388 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
TOP2AP11388 SNORA40.6-201ENST00000391153 128 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 SNORD121B-201ENST00000458838 81 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 AC090515.1-201ENST00000465295 476 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP2AP11388 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.39□□□□□ -2.03
TOP2AP11388 MIR4452-201ENST00000583004 71 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 OR4G1P-201ENST00000588632 938 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 AC080078.3-201ENST00000605407 463 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 MIR6078-201ENST00000611069 100 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.39□□□□□ -2.03
TOP2AP11388 AL133216.2-202ENST00000634512 349 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 AC002546.1-201ENST00000588041 2504 ntBASIC2.39□□□□□ -2.03
TOP2AP11388 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TOP2AP11388 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.38□□□□□ -2.03
TOP2AP11388 Z85994.2-201ENST00000434327 452 ntBASIC2.38□□□□□ -2.03
TOP2AP11388 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.38□□□□□ -2.03
TOP2AP11388 HMGN1P7-201ENST00000491722 313 ntBASIC2.38□□□□□ -2.03
TOP2AP11388 Y_RNA.675-201ENST00000516389 149 ntBASIC2.38□□□□□ -2.03
TOP2AP11388 AC084757.1-201ENST00000559987 490 ntBASIC2.38□□□□□ -2.03
TOP2AP11388 STMN1P1-201ENST00000617809 440 ntBASIC2.38□□□□□ -2.03
TOP2AP11388 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TOP2AP11388 ANAPC10P1-201ENST00000395991 556 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 AL445183.3-201ENST00000414168 502 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP2AP11388 AP005136.1-201ENST00000579765 429 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 uc_338.20-201ENST00000621563 178 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP2AP11388 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TOP2AP11388 PABPC1P9-201ENST00000426076 1612 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 SNORD114-22-201ENST00000365423 72 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 AC243772.1-201ENST00000451620 410 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.37□□□□□ -2.03
TOP2AP11388 AC092436.3-201ENST00000511788 257 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.37□□□□□ -2.03
TOP2AP11388 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.37□□□□□ -2.03
TOP2AP11388 OR10AB1P-201ENST00000609613 938 ntBASIC2.37□□□□□ -2.03
TOP2AP11388 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP2AP11388 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP2AP11388 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP2AP11388 AC090740.1-201ENST00000623193 2262 ntBASIC2.36□□□□□ -2.03
TOP2AP11388 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP2AP11388 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP2AP11388 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.36□□□□□ -2.03
TOP2AP11388 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.36□□□□□ -2.03
TOP2AP11388 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
TOP2AP11388 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.35□□□□□ -2.03
TOP2AP11388 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TOP2AP11388 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 MIR124-3-201ENST00000384866 87 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.35□□□□□ -2.03
TOP2AP11388 RFESDP1-201ENST00000422350 461 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 PSMA2P3-201ENST00000429685 675 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 MTND4LP12-201ENST00000448237 295 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 AC034222.1-201ENST00000494052 532 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 SNORD116-26-201ENST00000516006 96 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.35□□□□□ -2.03
TOP2AP11388 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.35□□□□□ -2.03
TOP2AP11388 APOOP1-201ENST00000604695 592 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 AP000560.1-201ENST00000624150 1937 ntBASIC2.35□□□□□ -2.03
TOP2AP11388 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.34□□□□□ -2.03
TOP2AP11388 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TOP2AP11388 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
TOP2AP11388 AC093084.1-201ENST00000424233 687 ntBASIC2.34□□□□□ -2.03
TOP2AP11388 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.34□□□□□ -2.03
TOP2AP11388 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.34□□□□□ -2.03
TOP2AP11388 AC010625.1-201ENST00000511296 403 ntBASIC2.34□□□□□ -2.03
TOP2AP11388 AC018754.1-201ENST00000607486 925 ntBASIC2.34□□□□□ -2.03
TOP2AP11388 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.33□□□□□ -2.04
TOP2AP11388 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms