Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RPS4XP10-201ENST00000465034 731 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC093767.1-201ENST00000504523 156 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.6□□□□□ -1.67
SNRPA1P09661 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.6□□□□□ -1.67
SNRPA1P09661 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.6□□□□□ -1.67
SNRPA1P09661 AC123904.2-201ENST00000548059 300 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AL845331.3-202ENST00000562856 261 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 MIR3200-201ENST00000580767 85 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC091135.1-201ENST00000585943 307 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC008277.2-201ENST00000605196 797 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 OR6R2P-201ENST00000609216 300 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AL161734.1-201ENST00000609720 557 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.6□□□□□ -1.67
SNRPA1P09661 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.6□□□□□ -1.67
SNRPA1P09661 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC010149.2-201ENST00000637608 315 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 AC092125.1-201ENST00000562568 1995 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNRPA1P09661 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNRPA1P09661 OR5J1P-201ENST00000313544 939 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNRPA1P09661 RNU6-28P-201ENST00000362378 107 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 RNU6-282P-201ENST00000365357 103 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 RNU6-114P-201ENST00000384704 105 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 RPL31P45-201ENST00000419532 356 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.59□□□□□ -1.67
SNRPA1P09661 MTCO1P20-201ENST00000425366 358 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.59□□□□□ -1.67
SNRPA1P09661 ZNF863P-201ENST00000426746 417 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.59□□□□□ -1.67
SNRPA1P09661 MTCO2P11-201ENST00000431069 680 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 MTCYBP45-201ENST00000435243 565 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 ELL2P4-201ENST00000446870 1376 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 MTND2P24-201ENST00000453434 806 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AL359385.1-201ENST00000456509 365 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC007182.2-201ENST00000489251 402 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC114967.1-201ENST00000504890 259 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC117522.1-201ENST00000509821 380 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC114781.4-201ENST00000513707 639 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 Y_RNA.702-201ENST00000516843 96 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 RNU6-201P-201ENST00000517100 61 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.59□□□□□ -1.67
SNRPA1P09661 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.59□□□□□ -1.67
SNRPA1P09661 ADI1P3-201ENST00000549509 470 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 NCAPGP2-201ENST00000557911 754 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 MIR5195-201ENST00000583555 115 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.59□□□□□ -1.67
SNRPA1P09661 AL391646.1-201ENST00000603860 190 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC115621.1-201ENST00000604653 858 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 MIR98-201ENST00000606724 119 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 OR10AB1P-201ENST00000609613 938 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNRPA1P09661 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SNRPA1P09661 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.59□□□□□ -1.67
SNRPA1P09661 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.59□□□□□ -1.67
SNRPA1P09661 MIR6864-201ENST00000617935 70 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC009159.1-201ENST00000618386 642 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC009318.4-201ENST00000620496 486 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 AC004009.2-201ENST00000623016 728 ntBASIC4.59□□□□□ -1.67
SNRPA1P09661 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SNRPA1P09661 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SNRPA1P09661 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 Y_RNA.295-201ENST00000364918 102 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 RNU6-1103P-201ENST00000384150 107 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 RNU6-876P-201ENST00000391295 104 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 FGF7P8-201ENST00000402994 292 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 RNU2-21P-201ENST00000410368 188 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC127391.1-201ENST00000411737 98 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC138393.2-201ENST00000414742 246 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.58□□□□□ -1.68
SNRPA1P09661 USP9YP27-201ENST00000418455 438 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 AC133104.1-201ENST00000429100 218 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.58□□□□□ -1.68
SNRPA1P09661 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 MTCO3P18-201ENST00000440206 761 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.58□□□□□ -1.68
SNRPA1P09661 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 MTND3P10-201ENST00000450967 341 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 U3.44-201ENST00000458938 192 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC023598.1-201ENST00000472521 361 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC025518.1-201ENST00000479856 347 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 AC110792.2-201ENST00000510278 224 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms