Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC008432.1-201ENST00000615912 1320 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL1P09341 HMGB1P5-201ENST00000255320 642 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 SNORD82-201ENST00000365530 70 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 RNU6-1035P-201ENST00000384477 107 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CXCL1P09341 TAF9BP2-201ENST00000400856 499 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 AL122016.1-201ENST00000403365 367 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 SNORA11B-201ENST00000408175 129 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL1P09341 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 ARL5AP4-201ENST00000430731 512 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL1P09341 MTND2P21-201ENST00000436242 1042 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL1P09341 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL1P09341 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL1P09341 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL1P09341 AL359273.1-201ENST00000510918 627 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL1P09341 RNU5A-7P-201ENST00000515979 116 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 RNU6-798P-201ENST00000516912 103 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 BTF3P12-201ENST00000519620 469 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.68□□□□□ -2.14
CXCL1P09341 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL1P09341 EIF1AXP2-201ENST00000555940 413 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 AL137246.1-201ENST00000607072 977 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 AC097504.2-201ENST00000608088 454 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL1P09341 AC009831.4-201ENST00000620744 325 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.68□□□□□ -2.14
CXCL1P09341 AL031601.2-202ENST00000622650 282 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 DUXAP9-208ENST00000622815 614 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL1P09341 AC093591.3-201ENST00000634516 308 ntBASIC1.68□□□□□ -2.14
CXCL1P09341 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CXCL1P09341 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL1P09341 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL1P09341 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CXCL1P09341 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 SNORD51-201ENST00000384320 80 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 RNU6-882P-201ENST00000391025 103 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AL023807.1-201ENST00000407932 359 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 RNU6-920P-201ENST00000410926 92 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.67□□□□□ -2.14
CXCL1P09341 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL1P09341 RPL7P49-201ENST00000471402 708 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 RPL23AP41-201ENST00000484754 458 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AC234781.5-201ENST00000508429 271 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 RNU6-27P-201ENST00000516146 107 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 RPS3AP23-202ENST00000574601 686 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 AC007621.1-201ENST00000604544 437 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AC103710.4-201ENST00000609301 899 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AC012640.5-201ENST00000623897 319 ntBASIC1.67□□□□□ -2.14
CXCL1P09341 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
CXCL1P09341 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL1P09341 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CXCL1P09341 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CXCL1P09341 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 KRR1P1-201ENST00000419430 803 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 PNRC2P1-201ENST00000423940 420 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.66□□□□□ -2.14
CXCL1P09341 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
CXCL1P09341 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.66□□□□□ -2.14
CXCL1P09341 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.66□□□□□ -2.14
CXCL1P09341 AL049714.1-201ENST00000466686 347 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 MTND4LP3-201ENST00000468320 276 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 RPL31P60-201ENST00000478450 367 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 AC080014.1-201ENST00000496877 1201 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.66□□□□□ -2.14
CXCL1P09341 AC118942.1-201ENST00000529674 1035 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.66□□□□□ -2.14
CXCL1P09341 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CXCL1P09341 GTF2IP8-201ENST00000560687 584 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.66□□□□□ -2.14
CXCL1P09341 AGGF1P5-201ENST00000567900 919 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 MIR3944-201ENST00000581277 108 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.66□□□□□ -2.14
CXCL1P09341 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.66□□□□□ -2.14
CXCL1P09341 AC009314.1-201ENST00000603871 304 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 AC009032.1-201ENST00000617574 431 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.66□□□□□ -2.14
CXCL1P09341 AC010872.1-201ENST00000624225 675 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 AC091925.2-201ENST00000625059 256 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms