Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL009174.1-201ENST00000426577 416 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A2P08572 RPS26P56-201ENST00000444468 240 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 Z99714.1-201ENST00000450463 807 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AP000852.1-201ENST00000472460 573 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 SYPL1P1-201ENST00000473622 768 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A2P08572 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A2P08572 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A2P08572 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A2P08572 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A2P08572 AC074051.3-201ENST00000570238 358 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.99□□□□□ -2.09
COL4A2P08572 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AC091948.2-201ENST00000636510 279 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 AC080128.1-201ENST00000474389 1917 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 API5P2-201ENST00000397055 1498 ntBASIC1.99□□□□□ -2.09
COL4A2P08572 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A2P08572 MIR16-2-201ENST00000362117 81 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL4A2P08572 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A2P08572 FNDC3CP-201ENST00000420795 1155 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 AC246680.2-201ENST00000422106 389 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.98□□□□□ -2.09
COL4A2P08572 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.98□□□□□ -2.09
COL4A2P08572 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.98□□□□□ -2.09
COL4A2P08572 ATP5F1P1-201ENST00000433775 569 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A2P08572 AL591719.1-201ENST00000444669 744 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A2P08572 RPL23AP70-201ENST00000483361 460 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.98□□□□□ -2.09
COL4A2P08572 SNORA76.2-201ENST00000517095 137 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 HIGD1AP6-201ENST00000521833 279 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 HMGB1P1-201ENST00000522557 636 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 AC109635.4-202ENST00000531666 412 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 OR8K4P-201ENST00000534608 872 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL4A2P08572 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.98□□□□□ -2.09
COL4A2P08572 SNRPGP1-201ENST00000553864 222 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.98□□□□□ -2.09
COL4A2P08572 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.98□□□□□ -2.09
COL4A2P08572 AC068790.3-201ENST00000602988 553 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 snoU13.31-201ENST00000607291 104 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
COL4A2P08572 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.98□□□□□ -2.09
COL4A2P08572 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL4A2P08572 SNORD56.4-201ENST00000363883 71 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 Y_RNA.466-201ENST00000384294 113 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 RNU6-1226P-201ENST00000384317 107 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 PAICSP7-201ENST00000419829 962 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.97□□□□□ -2.09
COL4A2P08572 RAB11AP1-201ENST00000442978 646 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 RPL23AP7-203ENST00000449021 469 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 BX248409.1-201ENST00000455497 255 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 MTND2P30-201ENST00000456663 382 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC025768.1-201ENST00000510057 267 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AF279873.1-201ENST00000523393 313 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC092470.1-201ENST00000546187 132 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC107954.1-201ENST00000565906 727 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.97□□□□□ -2.09
COL4A2P08572 MIR3690-201ENST00000580266 75 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 OR4G1P-201ENST00000588632 938 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC023043.2-201ENST00000589678 1026 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 HMGN2P28-201ENST00000606102 262 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AL445493.3-201ENST00000619568 477 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC002064.3-201ENST00000623448 346 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 MTND5P31-201ENST00000419366 1374 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 WWP1P1-201ENST00000466609 2769 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.97□□□□□ -2.09
COL4A2P08572 U8.10-201ENST00000384260 133 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 RPL23AP39-201ENST00000415533 405 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 MTCYBP24-201ENST00000420387 1106 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 OFD1P18Y-201ENST00000420889 959 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 MTCO3P30-201ENST00000426425 670 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 MTND4P15-201ENST00000437913 1033 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms