Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
VTNP04004 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
VTNP04004 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTNP04004 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VTNP04004 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.35□□□□□ -1.87
VTNP04004 SNORA51.2-201ENST00000364595 132 ntBASIC3.35□□□□□ -1.87
VTNP04004 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VTNP04004 RNU6-821P-201ENST00000390995 107 ntBASIC3.35□□□□□ -1.87
VTNP04004 RNU2-37P-201ENST00000410695 177 ntBASIC3.35□□□□□ -1.87
VTNP04004 TPMTP3-201ENST00000411928 735 ntBASIC3.35□□□□□ -1.87
VTNP04004 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.35□□□□□ -1.87
VTNP04004 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.35□□□□□ -1.87
VTNP04004 AL590233.1-201ENST00000430017 456 ntBASIC3.35□□□□□ -1.87
VTNP04004 ISCA1P2-201ENST00000438679 421 ntBASIC3.35□□□□□ -1.87
VTNP04004 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 MTND1P30-201ENST00000441241 901 ntBASIC3.35□□□□□ -1.87
VTNP04004 ARPC3P5-201ENST00000448802 534 ntBASIC3.35□□□□□ -1.87
VTNP04004 RPL36AP33-201ENST00000450395 310 ntBASIC3.35□□□□□ -1.87
VTNP04004 RPL9P32-201ENST00000464118 620 ntBASIC3.35□□□□□ -1.87
VTNP04004 RPL30P9-201ENST00000465586 330 ntBASIC3.35□□□□□ -1.87
VTNP04004 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VTNP04004 HMGB1P22-201ENST00000505315 124 ntBASIC3.35□□□□□ -1.87
VTNP04004 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
VTNP04004 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 AC117532.1-201ENST00000514638 323 ntBASIC3.35□□□□□ -1.87
VTNP04004 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
VTNP04004 HSPA8P13-201ENST00000523715 472 ntBASIC3.35□□□□□ -1.87
VTNP04004 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.35□□□□□ -1.87
VTNP04004 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.35□□□□□ -1.87
VTNP04004 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.35□□□□□ -1.87
VTNP04004 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.35□□□□□ -1.87
VTNP04004 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.35□□□□□ -1.87
VTNP04004 AC012182.1-201ENST00000570133 895 ntBASIC3.35□□□□□ -1.87
VTNP04004 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
VTNP04004 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
VTNP04004 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
VTNP04004 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
VTNP04004 AC040168.1-201ENST00000623594 991 ntBASIC3.35□□□□□ -1.87
VTNP04004 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
VTNP04004 DDX43P2-201ENST00000604753 1354 ntBASIC3.35□□□□□ -1.87
VTNP04004 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VTNP04004 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VTNP04004 RPL7P26-201ENST00000333817 754 ntBASIC3.34□□□□□ -1.87
VTNP04004 RNU6-28P-201ENST00000362378 107 ntBASIC3.34□□□□□ -1.87
VTNP04004 RNA5SP258-201ENST00000362750 119 ntBASIC3.34□□□□□ -1.87
VTNP04004 SNORD116-1-201ENST00000384335 95 ntBASIC3.34□□□□□ -1.87
VTNP04004 MT-TH-201ENST00000387441 69 ntBASIC3.34□□□□□ -1.87
VTNP04004 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VTNP04004 RPL7P8-201ENST00000411964 730 ntBASIC3.34□□□□□ -1.87
VTNP04004 EEF1A1P41-201ENST00000414667 207 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.34□□□□□ -1.87
VTNP04004 AL390023.1-201ENST00000428836 262 ntBASIC3.34□□□□□ -1.87
VTNP04004 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.34□□□□□ -1.87
VTNP04004 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.34□□□□□ -1.87
VTNP04004 AC107083.1-201ENST00000439643 279 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC118469.1-201ENST00000442943 488 ntBASIC3.34□□□□□ -1.87
VTNP04004 KATNBL1P3-201ENST00000443475 909 ntBASIC3.34□□□□□ -1.87
VTNP04004 MTND2P4-201ENST00000445034 1004 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC002381.1-201ENST00000447049 280 ntBASIC3.34□□□□□ -1.87
VTNP04004 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.34□□□□□ -1.87
VTNP04004 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.34□□□□□ -1.87
VTNP04004 KATNBL1P6-201ENST00000453433 915 ntBASIC3.34□□□□□ -1.87
VTNP04004 HMGB1P15-201ENST00000453854 435 ntBASIC3.34□□□□□ -1.87
VTNP04004 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
VTNP04004 RPL31P50-201ENST00000471002 296 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC023424.2-201ENST00000493479 777 ntBASIC3.34□□□□□ -1.87
VTNP04004 AP001086.1-201ENST00000494882 321 ntBASIC3.34□□□□□ -1.87
VTNP04004 MTCO3P28-201ENST00000513351 515 ntBASIC3.34□□□□□ -1.87
VTNP04004 RNA5SP216-201ENST00000516111 123 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC090136.1-201ENST00000520009 240 ntBASIC3.34□□□□□ -1.87
VTNP04004 OR6C7P-201ENST00000547875 934 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC110760.3-201ENST00000598794 467 ntBASIC3.34□□□□□ -1.87
VTNP04004 AL590229.1-201ENST00000603497 542 ntBASIC3.34□□□□□ -1.87
VTNP04004 AL358072.1-201ENST00000604156 575 ntBASIC3.34□□□□□ -1.87
VTNP04004 AL365503.1-201ENST00000605247 905 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC097468.3-201ENST00000607956 456 ntBASIC3.34□□□□□ -1.87
VTNP04004 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
VTNP04004 AC073114.1-201ENST00000612027 490 ntBASIC3.34□□□□□ -1.87
VTNP04004 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.34□□□□□ -1.87
VTNP04004 AC073476.4-201ENST00000628409 72 ntBASIC3.34□□□□□ -1.87
VTNP04004 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VTNP04004 GABPAP-201ENST00000419271 1356 ntBASIC3.34□□□□□ -1.88
VTNP04004 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.88
VTNP04004 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTNP04004 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
VTNP04004 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
VTNP04004 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VTNP04004 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.33□□□□□ -1.88
VTNP04004 AC073325.2-201ENST00000339545 159 ntBASIC3.33□□□□□ -1.88
VTNP04004 RNU6-500P-201ENST00000362349 107 ntBASIC3.33□□□□□ -1.88
VTNP04004 RNU6-600P-201ENST00000362524 99 ntBASIC3.33□□□□□ -1.88
VTNP04004 HSPE1P26-201ENST00000405341 275 ntBASIC3.33□□□□□ -1.88
VTNP04004 RNA5SP31-201ENST00000411144 127 ntBASIC3.33□□□□□ -1.88
VTNP04004 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.33□□□□□ -1.88
VTNP04004 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms