Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC004853.1-201ENST00000604902 698 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AL139418.1-201ENST00000613613 177 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AL355493.4-201ENST00000618530 292 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFBP01127 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFBP01127 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.23□□□□□ -1.89
PDGFBP01127 AC009812.4-201ENST00000569134 1805 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
PDGFBP01127 AP000776.1-201ENST00000530032 1663 ntBASIC3.23□□□□□ -1.89
PDGFBP01127 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.23□□□□□ -1.89
PDGFBP01127 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDGFBP01127 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFBP01127 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFBP01127 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFBP01127 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 SKINT1L-201ENST00000401057 817 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 USP9YP33-201ENST00000412220 421 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 RPL22P18-201ENST00000417197 377 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFBP01127 MYL8P-204ENST00000431574 518 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 USP9YP35-201ENST00000435696 412 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.22□□□□□ -1.89
PDGFBP01127 AC105272.1-201ENST00000438604 198 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 SDCBPP1-201ENST00000440192 890 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AC093156.1-201ENST00000440382 670 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.22□□□□□ -1.89
PDGFBP01127 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.22□□□□□ -1.89
PDGFBP01127 AL592447.1-201ENST00000447592 540 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 ARPC3P5-201ENST00000448802 534 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AL353691.1-201ENST00000451332 387 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 RNU6-150P-201ENST00000516237 95 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PDGFBP01127 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.22□□□□□ -1.89
PDGFBP01127 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.22□□□□□ -1.89
PDGFBP01127 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.22□□□□□ -1.89
PDGFBP01127 AL158211.1-201ENST00000566763 763 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AC011260.1-201ENST00000578420 472 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 ATP1B3P1-201ENST00000605365 821 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AC021755.4-201ENST00000616620 456 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AC099506.2-201ENST00000623074 221 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AP003122.6-201ENST00000623831 495 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AP000676.4-201ENST00000624659 623 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.22□□□□□ -1.89
PDGFBP01127 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.22□□□□□ -1.89
PDGFBP01127 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.22□□□□□ -1.89
PDGFBP01127 AC008568.2-201ENST00000623862 2313 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
PDGFBP01127 MTND5P24-201ENST00000438892 1767 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AL079343.1-201ENST00000572358 1771 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
PDGFBP01127 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFBP01127 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
PDGFBP01127 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.21□□□□□ -1.9
PDGFBP01127 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDGFBP01127 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PDGFBP01127 RNU6-1214P-201ENST00000363650 109 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 SNORA14A-201ENST00000364773 135 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 MIR135A2-201ENST00000384854 100 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 MIR1284-201ENST00000408337 120 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.21□□□□□ -1.9
PDGFBP01127 RPS24P7-201ENST00000416921 246 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 HMGB1P49-201ENST00000418882 569 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 HSPE1P1-201ENST00000421494 318 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFBP01127 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC024082.2-201ENST00000434771 238 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFBP01127 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFBP01127 FDX1P2-201ENST00000450769 375 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 EEF1B2P7-201ENST00000451177 676 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 TRGVB-201ENST00000453257 471 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 MTCO3P16-201ENST00000454456 754 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 DNAJC19P1-201ENST00000455312 319 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC034244.1-201ENST00000507687 207 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AC114781.4-201ENST00000513707 639 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 Y_RNA.717-201ENST00000517106 92 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC008489.1-201ENST00000524271 483 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AP000926.4-201ENST00000527351 454 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFBP01127 MIR4769-201ENST00000584126 77 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 MIR7843-201ENST00000622274 79 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFBP01127 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC006927.4-201ENST00000639187 543 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDGFBP01127 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDGFBP01127 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PDGFBP01127 AC011460.1-201ENST00000636268 1834 ntBASIC3.21□□□□□ -1.9
PDGFBP01127 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms