Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.56□□□□□ -1.84
GGPS1O95749 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.56□□□□□ -1.84
GGPS1O95749 AC026801.2-201ENST00000515352 425 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.56□□□□□ -1.84
GGPS1O95749 DEFB108D-201ENST00000527787 222 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GGPS1O95749 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
GGPS1O95749 EIF4BP1-201ENST00000554881 351 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.56□□□□□ -1.84
GGPS1O95749 AL137843.1-201ENST00000605078 385 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 AC013244.3-201ENST00000605614 388 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 AP002826.1-201ENST00000608835 315 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 AC103706.2-201ENST00000638080 240 ntBASIC3.56□□□□□ -1.84
GGPS1O95749 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GGPS1O95749 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.56□□□□□ -1.84
GGPS1O95749 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
GGPS1O95749 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
GGPS1O95749 AC021755.1-201ENST00000559747 1447 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GGPS1O95749 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GGPS1O95749 Y_RNA.111-201ENST00000363248 100 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 MIR320C1-201ENST00000408566 88 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.55□□□□□ -1.84
GGPS1O95749 RN7SKP266-201ENST00000410232 287 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC109780.2-201ENST00000413467 845 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.55□□□□□ -1.84
GGPS1O95749 RPL27AP8-201ENST00000424277 446 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AL035407.1-201ENST00000429211 571 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC090774.1-201ENST00000435925 246 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 HMGB3P11-201ENST00000440127 604 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 MTND1P9-201ENST00000453775 944 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.55□□□□□ -1.84
GGPS1O95749 RPS27P29-201ENST00000463110 252 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 RPS3AP14-201ENST00000483907 780 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AP001025.2-201ENST00000490908 477 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC080014.1-201ENST00000496877 1201 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC104685.1-201ENST00000502445 371 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.55□□□□□ -1.84
GGPS1O95749 AC109464.2-201ENST00000510242 943 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 EEF1A1P37-201ENST00000522748 715 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AP001804.3-201ENST00000525146 880 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC022080.3-201ENST00000544433 482 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.55□□□□□ -1.84
GGPS1O95749 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.55□□□□□ -1.84
GGPS1O95749 AC055876.1-202ENST00000567053 138 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC136618.2-201ENST00000575091 400 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC105224.1-201ENST00000587055 421 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 PRELID3BP8-201ENST00000604148 295 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC024560.3-201ENST00000608482 349 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC099506.2-201ENST00000623074 221 ntBASIC3.55□□□□□ -1.84
GGPS1O95749 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.55□□□□□ -1.84
GGPS1O95749 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.55□□□□□ -1.84
GGPS1O95749 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GGPS1O95749 ZNF542P-204ENST00000482727 1305 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 SNORD56.3-201ENST00000363507 71 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 MIR493-201ENST00000385254 89 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.54□□□□□ -1.84
GGPS1O95749 HMGB3P23-201ENST00000414981 585 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC233728.2-201ENST00000425348 757 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.54□□□□□ -1.84
GGPS1O95749 OR4K11P-201ENST00000431829 904 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AL117351.1-201ENST00000438864 766 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC108734.1-201ENST00000439549 399 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AL831737.1-201ENST00000441288 271 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 Z99127.3-201ENST00000448158 395 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 KCTD9P5-201ENST00000504141 1170 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.54□□□□□ -1.84
GGPS1O95749 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GGPS1O95749 AC022690.1-201ENST00000526681 550 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AP002404.1-201ENST00000532005 451 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.54□□□□□ -1.84
GGPS1O95749 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.54□□□□□ -1.84
GGPS1O95749 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.54□□□□□ -1.84
GGPS1O95749 MIR3921-201ENST00000577308 85 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC034229.4-201ENST00000607861 441 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC009570.1-201ENST00000609599 745 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC006386.2-201ENST00000624491 75 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AC012005.1-201ENST00000624575 75 ntBASIC3.54□□□□□ -1.84
GGPS1O95749 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.54□□□□□ -1.84
GGPS1O95749 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GGPS1O95749 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GGPS1O95749 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GGPS1O95749 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
GGPS1O95749 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
GGPS1O95749 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
GGPS1O95749 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GGPS1O95749 AP000526.1-201ENST00000603308 1388 ntBASIC3.53□□□□□ -1.84
GGPS1O95749 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
GGPS1O95749 RPL21P132-201ENST00000331267 462 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms