Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RPS27P23-201ENST00000487608 251 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 AC140059.1-201ENST00000489238 361 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 HMGB1P38-201ENST00000490557 577 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 RNA5SP490-201ENST00000517141 136 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP4O75161 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP4O75161 AC090616.5-202ENST00000582111 297 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP4O75161 AC021851.1-201ENST00000608537 1082 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 VN1R7P-201ENST00000619242 903 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 AC092650.2-201ENST00000619984 902 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 AC010872.1-201ENST00000624225 675 ntBASIC2.83□□□□□ -1.96
NPHP4O75161 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP4O75161 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
NPHP4O75161 RNU6-374P-201ENST00000364146 108 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP4O75161 MIR9-3-201ENST00000385084 90 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 SAR1AP2-201ENST00000392696 594 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AL021407.1-201ENST00000404531 386 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AP000567.1-201ENST00000406413 156 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 PAICSP7-201ENST00000419829 962 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 MTCO3P43-201ENST00000440974 771 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 RNFT1P2-201ENST00000443064 757 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 RPL23AP20-201ENST00000447965 421 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.82□□□□□ -1.96
NPHP4O75161 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.82□□□□□ -1.96
NPHP4O75161 AC087879.1-201ENST00000474343 374 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP4O75161 AC104564.1-201ENST00000493028 407 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AC098799.2-201ENST00000509466 868 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 MTND5P4-201ENST00000514978 288 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.82□□□□□ -1.96
NPHP4O75161 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.82□□□□□ -1.96
NPHP4O75161 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.82□□□□□ -1.96
NPHP4O75161 AC020895.1-201ENST00000595362 272 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AC010678.1-201ENST00000614118 713 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 RMST_10.1-201ENST00000616309 154 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 FRG1HP-204ENST00000617940 757 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 AC092608.3-201ENST00000625017 386 ntBASIC2.82□□□□□ -1.96
NPHP4O75161 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP4O75161 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NPHP4O75161 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP4O75161 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP4O75161 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP4O75161 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NPHP4O75161 SNORA51.11-201ENST00000384442 131 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NPHP4O75161 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP4O75161 RNU4-78P-201ENST00000410940 126 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 AL445183.3-201ENST00000414168 502 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 RAD23BP2-201ENST00000416003 1207 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP4O75161 FABP5P3-201ENST00000437960 408 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.81□□□□□ -1.96
NPHP4O75161 RPS15AP1-201ENST00000457423 391 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 ARPC3P2-201ENST00000457786 533 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.81□□□□□ -1.96
NPHP4O75161 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP4O75161 MIR3690-201ENST00000580266 75 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 MIR4303-201ENST00000581299 66 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP4O75161 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP4O75161 AL118508.4-201ENST00000624142 1176 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 SEC63P2-201ENST00000503863 1939 ntBASIC2.81□□□□□ -1.96
NPHP4O75161 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPHP4O75161 AC010680.1-201ENST00000590024 3590 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 ZNF37BP-203ENST00000452306 1352 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AC027514.1-201ENST00000588561 1603 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 MIR607-201ENST00000385241 96 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AL358453.1-201ENST00000422522 250 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AC073310.1-201ENST00000423226 1033 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP4O75161 AC012181.1-201ENST00000479895 423 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AC104108.1-201ENST00000509930 412 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.8□□□□□ -1.96
NPHP4O75161 SNORA25.15-201ENST00000516487 89 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 RNA5SP402-201ENST00000517148 110 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
NPHP4O75161 DNAJC19P9-201ENST00000555084 351 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NPHP4O75161 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.8□□□□□ -1.96
NPHP4O75161 AC107954.1-201ENST00000565906 727 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AC013562.2-201ENST00000611632 603 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.8□□□□□ -1.96
NPHP4O75161 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.8□□□□□ -1.96
NPHP4O75161 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPHP4O75161 AC011978.2-201ENST00000569835 2054 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 PABPC1P7-201ENST00000413177 1513 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AL353746.1-201ENST00000566293 6881 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 AC026241.1-201ENST00000517873 2142 ntBASIC2.8□□□□□ -1.96
NPHP4O75161 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP4O75161 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP4O75161 RNA5SP295-201ENST00000362655 121 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 RNU6-335P-201ENST00000364563 113 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 UBE2V1P15-201ENST00000407776 448 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 AP000275.1-201ENST00000411943 390 ntBASIC2.79□□□□□ -1.96
NPHP4O75161 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.79□□□□□ -1.96
NPHP4O75161 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms