Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TRAV28-201ENST00000557548 323 ntBASIC2.36□□□□□ -2.03
SCN2BO60939 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN2BO60939 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN2BO60939 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
SCN2BO60939 AL450270.1-201ENST00000606160 391 ntBASIC2.36□□□□□ -2.03
SCN2BO60939 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN2BO60939 AL512283.1-201ENST00000606756 1384 ntBASIC2.36□□□□□ -2.03
SCN2BO60939 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SCN2BO60939 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN2BO60939 FRG1BP-201ENST00000278882 761 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SCN2BO60939 RNU6-859P-201ENST00000362728 107 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 SNORA38-201ENST00000363946 132 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN2BO60939 MIR196B-201ENST00000384852 84 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AL035405.1-201ENST00000400795 710 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 RNU2-47P-201ENST00000410649 186 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 RNU2-52P-201ENST00000410680 190 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 FCF1P2-201ENST00000415284 583 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AL512637.2-201ENST00000431287 1256 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN2BO60939 OR51B8P-201ENST00000449892 769 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AC011753.1-201ENST00000451001 220 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN2BO60939 AC108729.2-201ENST00000476543 840 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AL135752.1-201ENST00000479477 471 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 MRPL42P6-201ENST00000486397 371 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN2BO60939 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN2BO60939 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN2BO60939 AC118282.2-201ENST00000508739 374 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 MRPS36P2-201ENST00000512569 299 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 ATP5F1P5-201ENST00000526403 760 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN2BO60939 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN2BO60939 AC011611.5-201ENST00000552477 578 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 EIF4BP1-201ENST00000554881 351 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN2BO60939 AC093510.2-201ENST00000562820 896 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN2BO60939 AL160281.1-201ENST00000605307 311 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 OR2AS2P-201ENST00000606902 342 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AL449363.1-201ENST00000617815 186 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 AC092608.2-201ENST00000624427 218 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN2BO60939 AC022336.2-201ENST00000568966 2538 ntBASIC2.35□□□□□ -2.03
SCN2BO60939 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.03
SCN2BO60939 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 SNORA5B-201ENST00000363786 132 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 SNORD116-23-201ENST00000384645 92 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AL162578.1-201ENST00000406202 378 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 OR4K6P-201ENST00000416478 897 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 SPA17P1-201ENST00000416656 452 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 MTCO2P17-201ENST00000424336 677 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN2BO60939 TRIM60P13-201ENST00000432350 1283 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AL512844.2-201ENST00000433990 593 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN2BO60939 AC104389.3-201ENST00000445629 235 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN2BO60939 AC092155.2-201ENST00000454675 477 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN2BO60939 AC073901.1-201ENST00000462471 408 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 RPL21P47-201ENST00000483696 477 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AC096576.1-201ENST00000489014 359 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN2BO60939 KLRA1P-201ENST00000503499 986 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 AC113420.1-201ENST00000507903 571 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 NDUFB4P2-201ENST00000509515 391 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.34□□□□□ -2.03
SCN2BO60939 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.34□□□□□ -2.03
SCN2BO60939 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN2BO60939 AL671309.1-201ENST00000603750 544 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 KATNBL1P1-201ENST00000605192 748 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCN2BO60939 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SCN2BO60939 AC012321.1-201ENST00000561622 1588 ntBASIC2.34□□□□□ -2.03
SCN2BO60939 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SCN2BO60939 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.34□□□□□ -2.04
SCN2BO60939 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SCN2BO60939 ZNF849P-201ENST00000594711 1566 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 PABPC1P9-201ENST00000426076 1612 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 RNU5A-1-201ENST00000362698 116 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 SNORA80A-201ENST00000363922 136 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 U3.20-201ENST00000390909 217 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 U3.26-201ENST00000391236 204 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
SCN2BO60939 AC246680.2-201ENST00000422106 389 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 NDUFB4P7-201ENST00000423198 363 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN2BO60939 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.33□□□□□ -2.04
SCN2BO60939 UBE2V1P13-201ENST00000436983 439 ntBASIC2.33□□□□□ -2.04
SCN2BO60939 THAP5P1-201ENST00000439089 262 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms