Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC067747.1-201ENST00000608026 250 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AP002826.1-201ENST00000608835 315 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHOX2O60902 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SHOX2O60902 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHOX2O60902 AC093536.2-201ENST00000565257 1406 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 RNU6-1180P-201ENST00000364935 107 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 Y_RNA.508-201ENST00000384502 114 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 SNORD65C-201ENST00000390962 71 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC012497.1-201ENST00000429392 575 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.46□□□□□ -2.02
SHOX2O60902 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.46□□□□□ -2.02
SHOX2O60902 AC124916.1-201ENST00000444020 547 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 EEF1B2P7-201ENST00000451177 676 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.46□□□□□ -2.02
SHOX2O60902 RPL32P14-201ENST00000463196 378 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC090096.1-201ENST00000489168 390 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC048346.1-201ENST00000510247 144 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 RNA5SP135-201ENST00000517019 125 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 RNU6-548P-201ENST00000517083 115 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.46□□□□□ -2.02
SHOX2O60902 AP000873.5-201ENST00000533906 236 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.46□□□□□ -2.02
SHOX2O60902 AC079600.2-201ENST00000550076 130 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 OR11H5P-201ENST00000554039 926 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHOX2O60902 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.46□□□□□ -2.02
SHOX2O60902 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC061975.8-201ENST00000587058 721 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.46□□□□□ -2.02
SHOX2O60902 AC010620.2-201ENST00000600135 313 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC133794.1-201ENST00000602731 914 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 U73023.1-201ENST00000603134 700 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC098826.3-201ENST00000603823 466 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 HSPE1P7-201ENST00000604681 321 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 VN1R9P-201ENST00000614184 867 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC140725.3-201ENST00000616193 880 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.46□□□□□ -2.02
SHOX2O60902 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.46□□□□□ -2.02
SHOX2O60902 AC091925.2-201ENST00000625059 256 ntBASIC2.46□□□□□ -2.02
SHOX2O60902 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.46□□□□□ -2.02
SHOX2O60902 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SHOX2O60902 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHOX2O60902 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SHOX2O60902 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHOX2O60902 RNU6-251P-201ENST00000363235 104 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 Y_RNA.269-201ENST00000364685 89 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 SNORA51.6-201ENST00000384151 125 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 UBE2V1P15-201ENST00000407776 448 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOX2O60902 RPL7P30-201ENST00000420888 709 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOX2O60902 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.45□□□□□ -2.02
SHOX2O60902 NDUFB4P6-201ENST00000436819 366 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOX2O60902 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 AL513328.1-201ENST00000446460 224 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOX2O60902 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOX2O60902 AC092798.1-201ENST00000458542 409 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.45□□□□□ -2.02
SHOX2O60902 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHOX2O60902 AC118282.2-201ENST00000508739 374 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 RAC1P5-201ENST00000512182 576 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 SNORA70.16-201ENST00000516390 95 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AP000889.2-201ENST00000532684 490 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.45□□□□□ -2.02
SHOX2O60902 AP002770.2-201ENST00000543613 532 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
SHOX2O60902 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.45□□□□□ -2.02
SHOX2O60902 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SHOX2O60902 AC093519.1-201ENST00000566109 298 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AC009163.5-201ENST00000575421 637 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AC011260.1-201ENST00000578420 472 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 MIR3609-201ENST00000582661 80 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 NRBF2P5-201ENST00000603087 788 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AC079089.3-201ENST00000603094 673 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AC103798.2-201ENST00000624292 632 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 AL512506.2-201ENST00000624472 458 ntBASIC2.45□□□□□ -2.02
SHOX2O60902 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SHOX2O60902 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SHOX2O60902 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHOX2O60902 ZNF72P-201ENST00000425869 1908 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC009487.4-201ENST00000624969 3585 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 ZNF519P1-201ENST00000449011 1626 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 Y_RNA.4-201ENST00000362333 112 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 RNU6-1155P-201ENST00000363554 107 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 Y_RNA.796-201ENST00000364268 102 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 Y_RNA.799-201ENST00000364992 102 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 RNU6-650P-201ENST00000365658 111 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AL158050.1-201ENST00000416077 457 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.44□□□□□ -2.02
SHOX2O60902 AC234781.2-201ENST00000426370 994 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms