Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.34□□□□□ -1.87
SSX4O60224 ZNF285B-201ENST00000561698 1767 ntBASIC3.34□□□□□ -1.87
SSX4O60224 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX4O60224 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX4O60224 MIR208A-201ENST00000362287 71 ntBASIC3.34□□□□□ -1.87
SSX4O60224 RNU6-76P-201ENST00000384060 104 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AL136116.1-201ENST00000403591 381 ntBASIC3.34□□□□□ -1.87
SSX4O60224 SNORA3.3-201ENST00000408712 125 ntBASIC3.34□□□□□ -1.87
SSX4O60224 RNU4-65P-201ENST00000410473 140 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AL353777.1-201ENST00000425552 326 ntBASIC3.34□□□□□ -1.87
SSX4O60224 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX4O60224 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX4O60224 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.34□□□□□ -1.87
SSX4O60224 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 RPL35AP22-201ENST00000436855 335 ntBASIC3.34□□□□□ -1.87
SSX4O60224 HMGB1P12-201ENST00000438594 598 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 RNA5SP269-201ENST00000459032 137 ntBASIC3.34□□□□□ -1.87
SSX4O60224 RPL21P104-201ENST00000464143 478 ntBASIC3.34□□□□□ -1.87
SSX4O60224 RPL23AP41-201ENST00000484754 458 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 HMGN1P11-201ENST00000508668 303 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX4O60224 RNA5SP208-201ENST00000516156 78 ntBASIC3.34□□□□□ -1.87
SSX4O60224 RN7SKP60-201ENST00000516985 239 ntBASIC3.34□□□□□ -1.87
SSX4O60224 HMGN1P28-201ENST00000521340 364 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC022878.1-201ENST00000530684 149 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX4O60224 AL356432.3-201ENST00000568952 465 ntBASIC3.34□□□□□ -1.87
SSX4O60224 COX6CP3-201ENST00000580869 223 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC073544.2-201ENST00000601155 540 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC007038.2-201ENST00000608095 740 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX4O60224 AC138749.5-201ENST00000611461 208 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX4O60224 AC025594.3-201ENST00000613068 790 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC009090.3-201ENST00000616553 565 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC116165.2-201ENST00000616705 206 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AC009878.1-201ENST00000621819 340 ntBASIC3.34□□□□□ -1.87
SSX4O60224 AL034408.1-202ENST00000636088 415 ntBASIC3.34□□□□□ -1.87
SSX4O60224 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SSX4O60224 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX4O60224 MFSD8-236ENST00000641509 4050 ntBASIC3.34□□□□□ -1.88
SSX4O60224 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSX4O60224 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SSX4O60224 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.34□□□□□ -1.88
SSX4O60224 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX4O60224 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
SSX4O60224 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 FGF7P2-201ENST00000332473 296 ntBASIC3.33□□□□□ -1.88
SSX4O60224 SNORA63.1-201ENST00000362493 131 ntBASIC3.33□□□□□ -1.88
SSX4O60224 SNORA73.2-201ENST00000364946 201 ntBASIC3.33□□□□□ -1.88
SSX4O60224 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 Y_RNA.598-201ENST00000410480 95 ntBASIC3.33□□□□□ -1.88
SSX4O60224 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX4O60224 RPS7P13-201ENST00000413955 498 ntBASIC3.33□□□□□ -1.88
SSX4O60224 RPS15AP6-201ENST00000420703 385 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX4O60224 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX4O60224 KATNBL1P3-201ENST00000443475 909 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 AL360221.1-201ENST00000445989 335 ntBASIC3.33□□□□□ -1.88
SSX4O60224 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX4O60224 RPL21P11-201ENST00000461458 483 ntBASIC3.33□□□□□ -1.88
SSX4O60224 RN7SL330P-201ENST00000469709 307 ntBASIC3.33□□□□□ -1.88
SSX4O60224 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 RN7SL271P-201ENST00000487601 295 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX4O60224 AC109464.2-201ENST00000510242 943 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 RNU6-352P-201ENST00000516908 107 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC022616.6-201ENST00000520479 119 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AP000857.1-201ENST00000532151 543 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX4O60224 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX4O60224 AL133153.1-201ENST00000557756 303 ntBASIC3.33□□□□□ -1.88
SSX4O60224 NBR2-204ENST00000587322 63 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC022146.1-201ENST00000595307 847 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC119751.7-201ENST00000600494 245 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX4O60224 AC004908.2-201ENST00000609090 574 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC108747.1-201ENST00000609508 535 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC084757.4-201ENST00000616350 526 ntBASIC3.33□□□□□ -1.88
SSX4O60224 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC092140.2-201ENST00000618027 521 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AL603758.1-201ENST00000618654 241 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC012314.7-201ENST00000619693 93 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AP003399.1-201ENST00000637534 361 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC010149.2-201ENST00000637608 315 ntBASIC3.33□□□□□ -1.88
SSX4O60224 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms