Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FAM91A3P-201ENST00000456826 2544 ntBASIC4.11□□□□□ -1.75
PROM1O43490 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PROM1O43490 AC007685.1-201ENST00000329806 452 ntBASIC4.11□□□□□ -1.75
PROM1O43490 RNU5E-8P-201ENST00000363502 116 ntBASIC4.11□□□□□ -1.75
PROM1O43490 Y_RNA.157-201ENST00000363638 102 ntBASIC4.11□□□□□ -1.75
PROM1O43490 RNA5SP513-201ENST00000364648 118 ntBASIC4.11□□□□□ -1.75
PROM1O43490 RNU6-116P-201ENST00000384042 109 ntBASIC4.11□□□□□ -1.75
PROM1O43490 SNORA37-201ENST00000384504 129 ntBASIC4.11□□□□□ -1.75
PROM1O43490 Y_RNA.509-201ENST00000384506 99 ntBASIC4.11□□□□□ -1.75
PROM1O43490 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PROM1O43490 AC097374.1-203ENST00000400783 485 ntBASIC4.11□□□□□ -1.75
PROM1O43490 RNU6-373P-201ENST00000411247 98 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC127526.1-201ENST00000417526 366 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.11□□□□□ -1.75
PROM1O43490 AC008850.1-201ENST00000427546 362 ntBASIC4.11□□□□□ -1.75
PROM1O43490 RPS27AP12-201ENST00000429552 465 ntBASIC4.11□□□□□ -1.75
PROM1O43490 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC006512.1-201ENST00000468816 291 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC078785.3-201ENST00000476607 425 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC233702.1-201ENST00000482905 502 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PROM1O43490 RPL21P129-201ENST00000491732 478 ntBASIC4.11□□□□□ -1.75
PROM1O43490 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.11□□□□□ -1.75
PROM1O43490 FTH1P9-201ENST00000513251 355 ntBASIC4.11□□□□□ -1.75
PROM1O43490 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.11□□□□□ -1.75
PROM1O43490 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.11□□□□□ -1.75
PROM1O43490 OR5AL2P-201ENST00000532185 920 ntBASIC4.11□□□□□ -1.75
PROM1O43490 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.11□□□□□ -1.75
PROM1O43490 AC055876.1-202ENST00000567053 138 ntBASIC4.11□□□□□ -1.75
PROM1O43490 CYP4A43P-201ENST00000568156 121 ntBASIC4.11□□□□□ -1.75
PROM1O43490 RPS3AP23-202ENST00000574601 686 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC044792.1-201ENST00000593294 196 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC113403.1-201ENST00000604910 193 ntBASIC4.11□□□□□ -1.75
PROM1O43490 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PROM1O43490 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.11□□□□□ -1.75
PROM1O43490 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
PROM1O43490 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.11□□□□□ -1.75
PROM1O43490 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PROM1O43490 AC106871.1-201ENST00000568324 3102 ntBASIC4.11□□□□□ -1.75
PROM1O43490 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PROM1O43490 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PROM1O43490 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PROM1O43490 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PROM1O43490 AC006026.1-201ENST00000444025 1803 ntBASIC4.1□□□□□ -1.75
PROM1O43490 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PROM1O43490 OR1S2-201ENST00000302592 978 ntBASIC4.1□□□□□ -1.75
PROM1O43490 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
PROM1O43490 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 RNU6-845P-201ENST00000362578 103 ntBASIC4.1□□□□□ -1.75
PROM1O43490 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
PROM1O43490 RNA5SP509-201ENST00000364577 119 ntBASIC4.1□□□□□ -1.75
PROM1O43490 RNU6-359P-201ENST00000365466 108 ntBASIC4.1□□□□□ -1.75
PROM1O43490 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 MIR513A2-201ENST00000385249 127 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.1□□□□□ -1.75
PROM1O43490 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.1□□□□□ -1.75
PROM1O43490 AC093156.1-201ENST00000440382 670 ntBASIC4.1□□□□□ -1.75
PROM1O43490 RAC1P7-201ENST00000445367 377 ntBASIC4.1□□□□□ -1.75
PROM1O43490 CBWD4P-201ENST00000445695 655 ntBASIC4.1□□□□□ -1.75
PROM1O43490 PHBP16-201ENST00000446318 950 ntBASIC4.1□□□□□ -1.75
PROM1O43490 RN7SL98P-201ENST00000462271 300 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AL049714.1-201ENST00000466686 347 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.1□□□□□ -1.75
PROM1O43490 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.1□□□□□ -1.75
PROM1O43490 AC078918.1-201ENST00000498515 228 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AC139783.2-201ENST00000504847 1145 ntBASIC4.1□□□□□ -1.75
PROM1O43490 COX7A2P2-201ENST00000505291 250 ntBASIC4.1□□□□□ -1.75
PROM1O43490 PCBP2P3-201ENST00000509726 843 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.1□□□□□ -1.75
PROM1O43490 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
PROM1O43490 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.1□□□□□ -1.75
PROM1O43490 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.1□□□□□ -1.75
PROM1O43490 AC022690.1-201ENST00000526681 550 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AP003072.2-201ENST00000527756 676 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.1□□□□□ -1.75
PROM1O43490 VN1R85P-201ENST00000601587 426 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.1□□□□□ -1.75
PROM1O43490 uc_338.12-201ENST00000616344 181 ntBASIC4.1□□□□□ -1.75
PROM1O43490 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.1□□□□□ -1.75
PROM1O43490 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PROM1O43490 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.1□□□□□ -1.75
PROM1O43490 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PROM1O43490 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.09□□□□□ -1.75
PROM1O43490 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.09□□□□□ -1.75
PROM1O43490 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PROM1O43490 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PROM1O43490 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PROM1O43490 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PROM1O43490 AC067945.1-201ENST00000342609 618 ntBASIC4.09□□□□□ -1.75
PROM1O43490 RNU5A-8P-201ENST00000364102 114 ntBASIC4.09□□□□□ -1.75
PROM1O43490 RNU1-64P-201ENST00000365443 163 ntBASIC4.09□□□□□ -1.75
PROM1O43490 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PROM1O43490 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms