Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PRPF3O43395 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF3O43395 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF3O43395 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.4□□□□□ -1.7
PRPF3O43395 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.4□□□□□ -1.7
PRPF3O43395 MTND5P29-201ENST00000458676 1807 ntBASIC4.4□□□□□ -1.7
PRPF3O43395 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRPF3O43395 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF3O43395 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 RNY3P13-201ENST00000365542 102 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 MIR23A-201ENST00000385245 73 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PRPF3O43395 SNORA57.1-201ENST00000391227 145 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 TXNP7-201ENST00000406296 293 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 UBE2FP1-201ENST00000416536 447 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 MTND3P17-201ENST00000416968 344 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC010975.2-201ENST00000427781 588 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC008481.1-201ENST00000463278 396 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC108860.1-201ENST00000484521 383 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 TRBV12-2-201ENST00000489763 344 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC105252.1-201ENST00000503089 286 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 SLC25A15P5-201ENST00000508033 253 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.4□□□□□ -1.71
PRPF3O43395 FTH1P9-201ENST00000513251 355 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 RNU6-430P-201ENST00000517078 107 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 IGKV2D-23-201ENST00000518179 286 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AC093012.1-202ENST00000549403 582 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AC087883.1-201ENST00000551882 391 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AC125611.2-201ENST00000551907 647 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 EIF1P4-201ENST00000572664 335 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AC108747.1-201ENST00000609508 535 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AL161734.1-201ENST00000609720 557 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 AC048347.1-201ENST00000624621 427 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.4□□□□□ -1.71
PRPF3O43395 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF3O43395 AL672296.1-201ENST00000427780 2158 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF3O43395 MTND4P5-201ENST00000435821 1374 ntBASIC4.4□□□□□ -1.71
PRPF3O43395 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRPF3O43395 AC106871.1-201ENST00000568324 3102 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF3O43395 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF3O43395 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF3O43395 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 HSPE1P11-201ENST00000339579 310 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PRPF3O43395 MIR3074-201ENST00000384885 81 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 HSPE1P26-201ENST00000405341 275 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 RNU2-66P-201ENST00000410650 161 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC127391.1-201ENST00000411737 98 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF3O43395 AMD1P2-201ENST00000412936 992 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 RPL21P24-201ENST00000413752 448 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF3O43395 MTCO1P21-201ENST00000416634 589 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF3O43395 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF3O43395 MTND3P21-201ENST00000433774 331 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.39□□□□□ -1.71
PRPF3O43395 RPS29P7-201ENST00000439662 171 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 RN7SL132P-201ENST00000478131 296 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC011825.1-201ENST00000484967 388 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC068305.1-201ENST00000497406 726 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF3O43395 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.39□□□□□ -1.71
PRPF3O43395 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF3O43395 RNA5SP208-201ENST00000516156 78 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 RNU6-720P-201ENST00000516363 108 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 RNU6-840P-201ENST00000517275 65 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.39□□□□□ -1.71
PRPF3O43395 AC128657.1-201ENST00000549459 145 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AP001029.3-201ENST00000588063 596 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 AC098614.4-201ENST00000607601 462 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AL133173.2-201ENST00000614270 90 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC244100.1-202ENST00000621554 382 ntBASIC4.39□□□□□ -1.71
PRPF3O43395 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRPF3O43395 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.39□□□□□ -1.71
PRPF3O43395 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PRPF3O43395 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms