Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.01□□□□□ -1.61
SRGAP3O43295 TRBV26-201ENST00000456572 344 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 HMGN2P26-201ENST00000463169 339 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 MTCO2P29-201ENST00000465212 189 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 TXNP6-201ENST00000510190 310 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 FTH1P21-201ENST00000512179 511 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AC018797.3-201ENST00000513388 1241 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AC093677.1-201ENST00000514414 678 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 RNU6-1170P-201ENST00000515974 106 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AC018442.3-201ENST00000523025 183 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AC026464.5-201ENST00000562497 722 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AL353997.4-201ENST00000586196 166 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AC000123.2-201ENST00000623124 461 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.01□□□□□ -1.61
SRGAP3O43295 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5□□□□□ -1.61
SRGAP3O43295 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5□□□□□ -1.61
SRGAP3O43295 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 SNORA63C-201ENST00000364578 129 ntBASIC5□□□□□ -1.61
SRGAP3O43295 SNORA4.3-201ENST00000365564 137 ntBASIC5□□□□□ -1.61
SRGAP3O43295 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
SRGAP3O43295 PPIAP31-201ENST00000405422 495 ntBASIC5□□□□□ -1.61
SRGAP3O43295 RNU2-22P-201ENST00000411266 212 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AC012065.2-201ENST00000421295 375 ntBASIC5□□□□□ -1.61
SRGAP3O43295 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5□□□□□ -1.61
SRGAP3O43295 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5□□□□□ -1.61
SRGAP3O43295 RPL21P89-201ENST00000444021 467 ntBASIC5□□□□□ -1.61
SRGAP3O43295 HMGB1P15-201ENST00000453854 435 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AC007547.1-201ENST00000462177 490 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AC130509.1-201ENST00000464158 433 ntBASIC5□□□□□ -1.61
SRGAP3O43295 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5□□□□□ -1.61
SRGAP3O43295 AL163973.1-201ENST00000484753 577 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5□□□□□ -1.61
SRGAP3O43295 Y_RNA.691-201ENST00000516611 103 ntBASIC5□□□□□ -1.61
SRGAP3O43295 IGKV2-38-201ENST00000517443 247 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5□□□□□ -1.61
SRGAP3O43295 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5□□□□□ -1.61
SRGAP3O43295 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5□□□□□ -1.61
SRGAP3O43295 OR8R1P-201ENST00000543943 764 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5□□□□□ -1.61
SRGAP3O43295 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SRGAP3O43295 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5□□□□□ -1.61
SRGAP3O43295 AC104662.1-201ENST00000604448 511 ntBASIC5□□□□□ -1.61
SRGAP3O43295 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5□□□□□ -1.61
SRGAP3O43295 AC079597.1-201ENST00000624306 508 ntBASIC5□□□□□ -1.61
SRGAP3O43295 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5□□□□□ -1.61
SRGAP3O43295 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 IQCB2P-201ENST00000401788 1633 ntBASIC5□□□□□ -1.61
SRGAP3O43295 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5□□□□□ -1.61
SRGAP3O43295 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5□□□□□ -1.61
SRGAP3O43295 ASNSP3-201ENST00000451989 1306 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AC026951.1-201ENST00000559530 2459 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SRGAP3O43295 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SRGAP3O43295 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SRGAP3O43295 MIR369-201ENST00000362155 70 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SRGAP3O43295 MIR93-201ENST00000385024 80 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 RPL7P60-201ENST00000397636 735 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 Y_RNA.615-201ENST00000410769 117 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AL645937.1-202ENST00000421799 937 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AL589765.3-201ENST00000446084 462 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 RNU6-329P-201ENST00000459618 107 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.99□□□□□ -1.61
SRGAP3O43295 RPL23AP41-201ENST00000484754 458 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AC110792.2-201ENST00000510278 224 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.99□□□□□ -1.61
SRGAP3O43295 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SRGAP3O43295 BNIP3P6-201ENST00000549284 499 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms