Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL162274.2-201ENST00000614406 332 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC244100.1-202ENST00000621554 382 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC011330.2-201ENST00000621680 635 ntBASIC3□□□□□ -1.93
PDLIM1O00151 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM1O00151 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 RNU6-289P-201ENST00000364093 107 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 FAT1P1-201ENST00000406588 507 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 HSFY4P-201ENST00000415994 1181 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 RPS24P7-201ENST00000416921 246 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 RPL22P18-201ENST00000417197 377 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.99□□□□□ -1.93
PDLIM1O00151 MTCO2P17-201ENST00000424336 677 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 RAC1P7-201ENST00000445367 377 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 EEF1E1P1-201ENST00000446998 430 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 RPL23AP35-201ENST00000451906 501 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AP000705.1-201ENST00000454567 350 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AC009097.3-201ENST00000563557 1018 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 BDH2P1-201ENST00000602288 736 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 RPL12P50-201ENST00000603116 116 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AL031281.1-201ENST00000604049 488 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 ELOCP35-201ENST00000604289 336 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AC112220.3-201ENST00000605502 502 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AL590099.1-201ENST00000615276 138 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AC084757.4-201ENST00000616350 526 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AL445264.1-201ENST00000621719 171 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 AC004777.1-201ENST00000624317 287 ntBASIC2.99□□□□□ -1.93
PDLIM1O00151 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM1O00151 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM1O00151 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM1O00151 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.99□□□□□ -1.93
PDLIM1O00151 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM1O00151 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM1O00151 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM1O00151 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
PDLIM1O00151 OR5H2-201ENST00000355273 945 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 SNORA25.6-201ENST00000364121 118 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 RNA5SP72-201ENST00000364442 117 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 RNU4-28P-201ENST00000364739 141 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM1O00151 MIR34B-201ENST00000385076 84 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM1O00151 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM1O00151 MTND1P32-201ENST00000433043 938 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM1O00151 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM1O00151 ATP5C1P1-201ENST00000441945 895 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 RPS12P18-201ENST00000442381 270 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AL591719.1-201ENST00000444669 744 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 PAXBP1P1-201ENST00000449315 447 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AC234775.1-201ENST00000454247 670 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 USP9YP10-201ENST00000454868 628 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 ANKRD26P4-201ENST00000455755 950 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM1O00151 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM1O00151 HMGB1P41-201ENST00000520234 440 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AC103783.1-201ENST00000520506 373 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.98□□□□□ -1.93
PDLIM1O00151 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM1O00151 NCAPGP2-201ENST00000557911 754 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM1O00151 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.98□□□□□ -1.93
PDLIM1O00151 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM1O00151 AC034229.4-201ENST00000607861 441 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AL136981.2-201ENST00000617319 734 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 SNHG22-203ENST00000617833 660 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 AL353748.2-201ENST00000622148 471 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.98□□□□□ -1.93
PDLIM1O00151 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PDLIM1O00151 DDX43P2-201ENST00000604753 1354 ntBASIC2.98□□□□□ -1.93
PDLIM1O00151 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM1O00151 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.97□□□□□ -1.93
PDLIM1O00151 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PDLIM1O00151 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.97□□□□□ -1.93
PDLIM1O00151 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PDLIM1O00151 CUL1P1-201ENST00000509510 2425 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL161781.1-201ENST00000354277 403 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 Y_RNA.234-201ENST00000364409 97 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 RNA5SP267-201ENST00000364893 126 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM1O00151 MIR135A2-201ENST00000384854 100 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC083875.1-201ENST00000419509 405 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 USP9YP36-201ENST00000424581 829 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 MTATP6P4-201ENST00000427725 675 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 AC004866.2-201ENST00000438285 481 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 MTND1P31-201ENST00000449206 961 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms