Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV1-1A0A0B4J248 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-173P-201ENST00000364215 104 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 Y_RNA.500-201ENST00000384466 111 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-1005P-201ENST00000384519 107 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORA67.4-201ENST00000384688 142 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 EZH2P1-201ENST00000431167 291 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC105272.1-201ENST00000438604 198 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 MTND2P6-201ENST00000455337 1030 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC090515.1-201ENST00000465295 476 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 KLRA1P-201ENST00000503499 986 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC034159.1-201ENST00000513885 583 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 RNA5SP200-201ENST00000516360 103 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC087272.1-201ENST00000523624 533 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 HMGB1P14-201ENST00000557424 591 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC095057.3-201ENST00000567102 1157 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 MIR4513-201ENST00000581077 86 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC006023.1-201ENST00000603944 259 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC096586.1-201ENST00000610267 561 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC092608.2-201ENST00000624427 218 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 AC091925.2-201ENST00000625059 256 ntBASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
TRAV1-1A0A0B4J248 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-1155P-201ENST00000363554 107 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORD82-201ENST00000365530 70 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU1-52P-201ENST00000384190 164 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 MIR196B-201ENST00000384852 84 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AL121978.1-201ENST00000402778 359 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 U3.40-201ENST00000408706 208 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AL133384.1-201ENST00000412744 351 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 OR51A3P-201ENST00000413596 924 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 TATDN1P1-201ENST00000414123 891 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC063976.3-201ENST00000426849 329 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC009414.1-201ENST00000427200 443 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 RPL23AP16-201ENST00000441715 421 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 RNF2P1-201ENST00000442955 1010 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 MTND5P8-201ENST00000449817 1083 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AL118520.1-201ENST00000450770 291 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AP001486.1-201ENST00000463339 476 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AL049873.1-201ENST00000480540 376 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC096576.1-201ENST00000489014 359 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-27P-201ENST00000516146 107 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-551P-201ENST00000516661 103 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC109329.2-201ENST00000519658 482 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC103783.1-201ENST00000520506 373 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC124293.1-201ENST00000530034 493 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 ZNF705CP-201ENST00000530515 889 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 OR4P1P-201ENST00000530808 1136 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC021269.2-201ENST00000532318 330 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 GTF3AP2-201ENST00000557014 266 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC233266.2-201ENST00000567067 528 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 ADAM3B-201ENST00000569937 840 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC011260.1-201ENST00000578420 472 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC007619.2-201ENST00000605743 379 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AP003485.2-201ENST00000623636 610 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms