Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 RNA5SP453-201ENST00000362503 119 ntBASIC4.38□□□□□ -1.71
U3KQE9 RNU1-65P-201ENST00000363919 148 ntBASIC4.38□□□□□ -1.71
U3KQE9 SNORD50.2-201ENST00000365465 70 ntBASIC4.38□□□□□ -1.71
U3KQE9 RNU6-708P-201ENST00000384217 107 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPL21P75-201ENST00000396599 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 MIR190B-201ENST00000401119 79 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPL21P28-201ENST00000401418 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 AL513331.1-201ENST00000411908 397 ntBASIC4.38□□□□□ -1.71
U3KQE9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 AL133482.1-201ENST00000415988 498 ntBASIC4.38□□□□□ -1.71
U3KQE9 AL354868.1-201ENST00000417077 482 ntBASIC4.38□□□□□ -1.71
U3KQE9 AL590556.1-201ENST00000423231 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 BX276092.6-201ENST00000430476 250 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC087650.1-201ENST00000431445 468 ntBASIC4.38□□□□□ -1.71
U3KQE9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 RANP8-201ENST00000444720 713 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPS11P1-201ENST00000451072 473 ntBASIC4.38□□□□□ -1.71
U3KQE9 AL356981.1-201ENST00000454879 684 ntBASIC4.38□□□□□ -1.71
U3KQE9 BX276092.8-201ENST00000455722 250 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC108161.1-201ENST00000461060 402 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPL21P11-201ENST00000461458 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPL21P39-201ENST00000463605 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPS23P2-201ENST00000463671 415 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 AC132942.1-201ENST00000486753 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC093591.1-201ENST00000491435 481 ntBASIC4.38□□□□□ -1.71
U3KQE9 RPL21P16-201ENST00000495531 483 ntBASIC4.38□□□□□ -1.71
U3KQE9 SERF1AP1-201ENST00000514575 187 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 RNU1-86P-201ENST00000516108 154 ntBASIC4.38□□□□□ -1.71
U3KQE9 RNU1-107P-201ENST00000516617 154 ntBASIC4.38□□□□□ -1.71
U3KQE9 SNORA31.22-201ENST00000517204 135 ntBASIC4.38□□□□□ -1.71
U3KQE9 IGKV2-38-201ENST00000517443 247 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC109479.2-201ENST00000517842 174 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC011853.1-201ENST00000518911 454 ntBASIC4.38□□□□□ -1.71
U3KQE9 HMGN2P36-201ENST00000529541 409 ntBASIC4.38□□□□□ -1.71
U3KQE9 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
U3KQE9 MRPS36P4-201ENST00000534436 298 ntBASIC4.38□□□□□ -1.71
U3KQE9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 AC137627.1-201ENST00000545761 289 ntBASIC4.38□□□□□ -1.71
U3KQE9 TRAV37-201ENST00000553906 342 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 AC136932.1-201ENST00000574771 208 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.38□□□□□ -1.71
U3KQE9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.38□□□□□ -1.71
U3KQE9 COX6CP7-201ENST00000597056 208 ntBASIC4.38□□□□□ -1.71
U3KQE9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.38□□□□□ -1.71
U3KQE9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.38□□□□□ -1.71
U3KQE9 MIR6889-201ENST00000613185 59 ntBASIC4.38□□□□□ -1.71
U3KQE9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.38□□□□□ -1.71
U3KQE9 U73479.1-201ENST00000618062 168 ntBASIC4.38□□□□□ -1.71
U3KQE9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.38□□□□□ -1.71
U3KQE9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 AC007785.2-201ENST00000598627 1916 ntBASIC4.38□□□□□ -1.71
U3KQE9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
U3KQE9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
U3KQE9 AC114774.1-201ENST00000507410 1770 ntBASIC4.37□□□□□ -1.71
U3KQE9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.37□□□□□ -1.71
U3KQE9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.37□□□□□ -1.71
U3KQE9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
U3KQE9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
U3KQE9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.37□□□□□ -1.71
U3KQE9 MIR412-201ENST00000362142 91 ntBASIC4.37□□□□□ -1.71
U3KQE9 Y_RNA.33-201ENST00000362591 102 ntBASIC4.37□□□□□ -1.71
U3KQE9 RNA5SP477-201ENST00000362639 119 ntBASIC4.37□□□□□ -1.71
U3KQE9 Y_RNA.122-201ENST00000363331 96 ntBASIC4.37□□□□□ -1.71
U3KQE9 SNORD50B-201ENST00000364995 70 ntBASIC4.37□□□□□ -1.71
U3KQE9 MIR130A-201ENST00000385274 89 ntBASIC4.37□□□□□ -1.71
U3KQE9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
U3KQE9 RNU6-882P-201ENST00000391025 103 ntBASIC4.37□□□□□ -1.71
U3KQE9 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.37□□□□□ -1.71
U3KQE9 RNU6-712P-201ENST00000410558 100 ntBASIC4.37□□□□□ -1.71
U3KQE9 MRPL53P1-201ENST00000414323 319 ntBASIC4.37□□□□□ -1.71
U3KQE9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.37□□□□□ -1.71
U3KQE9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.37□□□□□ -1.71
U3KQE9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.37□□□□□ -1.71
U3KQE9 MRPS21P2-201ENST00000424704 264 ntBASIC4.37□□□□□ -1.71
U3KQE9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.37□□□□□ -1.71
U3KQE9 AC126120.1-201ENST00000431082 470 ntBASIC4.37□□□□□ -1.71
U3KQE9 HSPD1P21-201ENST00000436541 245 ntBASIC4.37□□□□□ -1.71
U3KQE9 AL163193.1-201ENST00000444895 788 ntBASIC4.37□□□□□ -1.71
U3KQE9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.37□□□□□ -1.71
U3KQE9 AL445433.1-201ENST00000457507 257 ntBASIC4.37□□□□□ -1.71
U3KQE9 AC022493.1-201ENST00000492984 337 ntBASIC4.37□□□□□ -1.71
U3KQE9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms