Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC006517.1-201ENST00000480485 328 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC011825.1-201ENST00000484967 388 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 VN1R105P-201ENST00000486595 910 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC107401.1-201ENST00000503426 685 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-410P-201ENST00000517006 107 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 SYF2P1-201ENST00000550658 413 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC124947.2-202ENST00000552735 133 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC022655.2-201ENST00000577280 318 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AL022154.1-201ENST00000604698 785 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AL110115.1-201ENST00000614396 364 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC026368.1-201ENST00000614934 690 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AP005264.7-201ENST00000625003 745 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AF127577.6-201ENST00000623352 2191 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 MTND5P29-201ENST00000458676 1807 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-1097P-201ENST00000363586 107 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-169P-201ENST00000365336 107 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RHOT1P2-201ENST00000366423 333 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR493-201ENST00000385254 89 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 SNORA57.1-201ENST00000391227 145 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AL451054.2-201ENST00000420896 202 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 OR2AS1P-201ENST00000427827 319 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 GPR143P-201ENST00000434155 205 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 Z74696.2-201ENST00000436514 498 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RN7SL604P-201ENST00000492589 296 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 HMGB1P29-201ENST00000505659 499 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-1092P-201ENST00000516955 87 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 NRON-201ENST00000517270 370 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RPS3AP4-201ENST00000555161 764 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC006960.3-201ENST00000561845 705 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 EIF1P4-201ENST00000572664 335 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 GLUD1P4-201ENST00000590914 418 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AC002545.1-201ENST00000592511 181 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 VN1R85P-201ENST00000601587 426 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AP002360.4-201ENST00000606980 481 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU4-89P-201ENST00000607443 133 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 AL158196.1-201ENST00000616786 434 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 LRRC77P-213ENST00000637727 880 ntBASIC4.61□□□□□ -1.67
COL4A3BPQ9Y5P4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR372-201ENST00000362225 67 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-108P-201ENST00000365558 107 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR93-201ENST00000385024 80 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 YPEL5P1-201ENST00000419731 367 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 MED13P1-201ENST00000428342 171 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 FCF1P1-201ENST00000432690 571 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 ATP5C1P1-201ENST00000441945 895 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 MTND1P1-201ENST00000445453 368 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 HMGN2P7-201ENST00000456186 273 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC022364.2-201ENST00000457963 554 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 SNRPGP3-201ENST00000469405 227 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 RPL31P60-201ENST00000478450 367 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC023194.1-201ENST00000493084 308 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC025554.1-201ENST00000505641 188 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC108078.1-201ENST00000508073 725 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC022880.1-201ENST00000534017 973 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC015813.4-201ENST00000610469 179 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AL592295.2-201ENST00000612578 206 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 OR5AK4P-201ENST00000635912 903 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms