Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 RPS7P13-201ENST00000413955 498 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC083875.1-201ENST00000419509 405 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 USP9YP36-201ENST00000424581 829 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC024082.2-201ENST00000434771 238 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 RPL23AP83-201ENST00000434984 473 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AL354941.1-201ENST00000438600 464 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 RN7SL442P-201ENST00000473804 320 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AL359273.1-201ENST00000510918 627 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC024589.1-201ENST00000512207 263 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 SNORA3.4-201ENST00000515969 96 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 SNORA70.24-201ENST00000517233 118 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC105224.1-201ENST00000587055 421 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC091903.1-201ENST00000624322 454 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AP000676.4-201ENST00000624659 623 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC004972.1-201ENST00000623934 2209 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 AC092447.10-201ENST00000620607 1652 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC008568.2-201ENST00000623862 2313 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 MIR491-201ENST00000384877 84 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 MTND4P13-201ENST00000402078 1023 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL357075.1-201ENST00000404107 726 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 FAT1P1-201ENST00000406588 507 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 MIR320C1-201ENST00000408566 88 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 TPMTP3-201ENST00000411928 735 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL022400.1-201ENST00000423946 935 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 BX119904.4-201ENST00000424402 301 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC234781.2-201ENST00000426370 994 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 TXNL1P1-201ENST00000429528 554 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 Z75741.1-201ENST00000446793 314 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC234775.1-201ENST00000454247 670 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL109741.2-201ENST00000455561 343 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 ARPC3P2-201ENST00000457786 533 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 HMGN2P13-201ENST00000476476 274 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC021146.5-201ENST00000503544 545 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC110794.1-201ENST00000505816 425 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 CBX3P3-201ENST00000508108 532 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-714P-201ENST00000516963 103 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 UBTFL10-201ENST00000528532 562 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AP003461.1-201ENST00000528866 78 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 OR4T1P-201ENST00000554933 911 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 OR4H12P-201ENST00000556269 907 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 MIR7112-201ENST00000616126 65 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC140725.3-201ENST00000616193 880 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC006111.3-201ENST00000622137 383 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AP000770.2-201ENST00000623694 100 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AL356596.1-201ENST00000624230 379 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 MIR3651-201ENST00000630427 90 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 AC093908.1-201ENST00000623125 8092 ntBASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
ATG4BQ9Y4P1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.03□□□□□ -1.92
ATG4BQ9Y4P1 AC110774.1-201ENST00000623567 2018 ntBASIC3.03□□□□□ -1.92
ATG4BQ9Y4P1 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
ATG4BQ9Y4P1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.03□□□□□ -1.92
ATG4BQ9Y4P1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATG4BQ9Y4P1 AC005832.2-201ENST00000538921 1430 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms