Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 HSFY5P-201ENST00000453726 309 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RPS29P12-201ENST00000460178 152 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC108729.1-201ENST00000487812 947 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RN7SL20P-201ENST00000488827 297 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 UBE2V1P12-201ENST00000503954 474 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC010587.2-201ENST00000511727 448 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1282P-201ENST00000516735 96 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 HIGD1AP5-201ENST00000529959 259 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC022662.1-201ENST00000580252 331 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC090186.1-201ENST00000605991 572 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 U3.45-201ENST00000607547 219 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AL049641.1-201ENST00000441055 1948 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RNU6-744P-201ENST00000365557 107 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1316P-201ENST00000384242 108 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RNU6-198P-201ENST00000384258 104 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1035P-201ENST00000384477 107 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AL512844.2-201ENST00000433990 593 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 USP9YP24-201ENST00000434374 697 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 MTCO2P20-201ENST00000437339 673 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 USP9YP17-201ENST00000444617 696 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RPL7P15-201ENST00000461190 712 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RPL21P10-201ENST00000463521 490 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RPL21P13-201ENST00000488305 481 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC021678.1-201ENST00000505195 936 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC110794.1-201ENST00000505816 425 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RNU1-95P-201ENST00000516357 160 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RNU1-128P-201ENST00000516704 160 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 SNORA31.21-201ENST00000517180 77 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 U73023.1-201ENST00000603134 700 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 RPP40P2-201ENST00000603596 712 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 MIR6758-201ENST00000620653 63 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AC009268.2-201ENST00000621925 457 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 AP000776.1-201ENST00000530032 1663 ntBASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
KCNIP3Q9Y2W7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AC007785.2-201ENST00000598627 1916 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AP003122.5-201ENST00000527668 3766 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 RNU6-289P-201ENST00000364093 107 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 RNU6-114P-201ENST00000384704 105 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 MIR325-201ENST00000385260 98 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 FO393413.1-201ENST00000402892 195 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 RN7SKP220-201ENST00000410611 288 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AL451074.5-201ENST00000415894 435 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AC008850.1-201ENST00000427546 362 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 RPL7L1P10-201ENST00000427790 463 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 HSPD1P21-201ENST00000436541 245 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AC112653.1-201ENST00000443851 386 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 BMI1P1-201ENST00000445879 941 ntBASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.52□□□□□ -2.01
KCNIP3Q9Y2W7 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms