Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.453-201ENST00000384223 109 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RNY3P14-201ENST00000384309 102 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MIR7-3-201ENST00000384898 110 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RPL23AP32-201ENST00000395315 459 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MTND4LP20-201ENST00000402379 270 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RN7SKP285-201ENST00000410137 318 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RNU2-15P-201ENST00000410692 191 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC127391.1-201ENST00000411737 98 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MTND3P17-201ENST00000416968 344 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MTCYBP24-201ENST00000420387 1106 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC069157.1-201ENST00000421749 137 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC133104.1-201ENST00000429100 218 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RPL31P35-201ENST00000431058 377 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 NEK4P1-201ENST00000433383 879 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 USP9YP7-201ENST00000436723 430 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AF228730.2-201ENST00000438784 848 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AL136380.1-201ENST00000447970 162 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 USP9YP32-201ENST00000452432 430 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 C1DP4-201ENST00000455429 424 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 snoU13.22-201ENST00000459428 104 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RPL21P11-201ENST00000461458 483 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RPS3AP14-201ENST00000483907 780 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC007182.2-201ENST00000489251 402 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RN7SL323P-201ENST00000494712 295 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC019235.1-201ENST00000503847 207 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC009646.1-201ENST00000510455 318 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 RN7SKP277-201ENST00000516895 283 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 TRMT10BP1-201ENST00000519377 943 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 OR5AQ1P-201ENST00000527596 927 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC118273.2-201ENST00000532092 465 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC123904.2-201ENST00000548059 300 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 YWHAQP7-201ENST00000603536 658 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC024220.1-201ENST00000603675 484 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC104458.1-201ENST00000608243 463 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC005344.1-201ENST00000613391 459 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AL133173.2-201ENST00000614270 90 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC009268.2-201ENST00000621925 457 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC012442.3-202ENST00000636742 206 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 AP001486.2-201ENST00000561652 5113 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF734P-201ENST00000419494 1534 ntBASIC4.26□□□□□ -1.73
SSX2IPQ9Y2D8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 Y_RNA.1-201ENST00000352915 104 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 Y_RNA.402-201ENST00000383972 102 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 Y_RNA.573-201ENST00000384763 105 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 MIR30B-201ENST00000384850 88 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 CALM2P3-201ENST00000400429 449 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 MIR1251-201ENST00000408552 70 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 GOT2P5-201ENST00000433995 546 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC002486.1-201ENST00000435098 391 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 UBE2V1P13-201ENST00000436983 439 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 RPS11P1-201ENST00000451072 473 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC092989.1-201ENST00000481235 277 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 FAM92A1P2-202ENST00000504766 877 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 Vault.3-201ENST00000516676 95 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 RNA5SP179-201ENST00000517284 121 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 HMGB1P33-201ENST00000563485 527 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms