Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH9Q9ULB4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH9Q9ULB4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CDH9Q9ULB4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH9Q9ULB4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.92□□□□□ -1.94
CDH9Q9ULB4 CDR1-202ENST00000625883 1485 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RNU6-1257P-201ENST00000384625 110 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RNA5SP252-201ENST00000391131 119 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RPL21P75-201ENST00000396599 483 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RPL21P28-201ENST00000401418 483 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AL592114.1-201ENST00000403842 483 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 MTATP6P27-201ENST00000416987 621 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC019097.1-201ENST00000424783 735 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC109583.1-201ENST00000432156 268 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 COX6CP2-201ENST00000444980 225 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AL031183.1-201ENST00000457667 207 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RPL21P39-201ENST00000463605 483 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC011979.1-201ENST00000472300 483 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RPL21P93-201ENST00000480465 489 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC233702.1-201ENST00000482905 502 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC087190.1-201ENST00000484462 480 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC093591.1-201ENST00000491435 481 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 RPL21P16-201ENST00000495531 483 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 TMEM251P1-201ENST00000503717 318 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 SUMO2P5-201ENST00000506790 245 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC034159.1-201ENST00000513885 583 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC007954.1-201ENST00000554198 494 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 HIGD1AP17-201ENST00000554576 276 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 MIR4319-201ENST00000577285 85 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 MIR3605-201ENST00000583214 100 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 HSPE1P7-201ENST00000604681 321 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH9Q9ULB4 AC084035.1-201ENST00000634543 607 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 CRYM-AS1-204ENST00000637983 556 ntBASIC2.91□□□□□ -1.94
CDH9Q9ULB4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CDH9Q9ULB4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CDH9Q9ULB4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC062016.1-201ENST00000355719 319 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 RNU6-224P-201ENST00000384055 107 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL592310.1-201ENST00000414330 671 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL161449.1-201ENST00000414531 1199 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 MTCO3P11-201ENST00000455103 774 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 OR6K1P-201ENST00000456766 971 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC069528.1-202ENST00000482888 637 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC113420.1-201ENST00000507903 571 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL359273.1-201ENST00000510918 627 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 RNU6-1225P-201ENST00000516336 65 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 RN7SKP31-201ENST00000516354 278 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AP003102.1-201ENST00000525638 661 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 DNAJC8P1-201ENST00000554535 372 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 MIR3921-201ENST00000577308 85 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC011260.1-201ENST00000578420 472 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC004853.1-201ENST00000604902 698 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 OR2AS2P-201ENST00000606902 342 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AP000254.1-201ENST00000609934 520 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 AC009237.15-201ENST00000610252 501 ntBASIC2.9□□□□□ -1.95
CDH9Q9ULB4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms