Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 U3.15-201ENST00000365398 212 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC009965.2-201ENST00000425328 970 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AL161670.1-201ENST00000554348 137 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AC084757.1-201ENST00000559987 490 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 MYL12BP1-201ENST00000569826 507 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 DUXAP9-208ENST00000622815 614 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 AL359740.1-201ENST00000624340 592 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 MIR4278-201ENST00000636094 69 ntBASIC2.2□□□□□ -2.06
PHRF1Q9P1Y6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 MIR92A2-201ENST00000385299 75 ntBASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 RNU6-174P-201ENST00000410406 106 ntBASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 ARPC3P2-201ENST00000457786 533 ntBASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 AC108734.3-201ENST00000481241 1165 ntBASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 AL354943.1-201ENST00000572103 781 ntBASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 AC011468.4-201ENST00000603942 409 ntBASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.19□□□□□ -2.06
PHRF1Q9P1Y6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 AC073464.3-201ENST00000422564 712 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 TPT1P14-201ENST00000448018 505 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 HMGB3P30-201ENST00000457863 606 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 AP000873.1-201ENST00000463987 400 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 RPL23AP55-201ENST00000498163 452 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 HSPE1P20-201ENST00000538133 289 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 MIR4452-201ENST00000583004 71 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 AC098848.2-201ENST00000588023 330 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PHRF1Q9P1Y6 RNU6-356P-201ENST00000384140 107 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 MCTS2P-201ENST00000394552 546 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AL034374.1-201ENST00000406329 351 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 PAICSP7-201ENST00000419829 962 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AL358075.3-201ENST00000426289 226 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC023050.1-201ENST00000498198 304 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 MTCYBP37-201ENST00000510642 1133 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC109471.1-201ENST00000511631 612 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 MTCO1P30-201ENST00000515244 580 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC015720.1-201ENST00000565251 277 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC013444.2-201ENST00000603317 787 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 MT-TP-201ENST00000387461 68 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 CALM1P2-201ENST00000452941 448 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC021146.7-201ENST00000509604 775 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 RN7SL622P-201ENST00000585292 275 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC113368.1-201ENST00000603736 382 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC105429.2-201ENST00000610567 517 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC090617.7-201ENST00000623952 126 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 AC098679.5-201ENST00000624394 571 ntBASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.17□□□□□ -2.06
PHRF1Q9P1Y6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 CCNB2P1-201ENST00000399411 1150 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 AL035405.1-201ENST00000400795 710 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 AC010683.1-201ENST00000473673 378 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 AL161713.1-201ENST00000555538 145 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 ACTR3BP3-201ENST00000565577 979 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 MIR3199-1-201ENST00000582434 88 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 AP001029.3-201ENST00000588063 596 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 AC084373.1-201ENST00000603311 235 ntBASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.16□□□□□ -2.06
PHRF1Q9P1Y6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PHRF1Q9P1Y6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.15□□□□□ -2.06
PHRF1Q9P1Y6 AC103710.2-202ENST00000641454 2853 ntBASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 Y_RNA.62-201ENST00000362840 99 ntBASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 PIGFP3-201ENST00000441918 722 ntBASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms