Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX1Q9NZR4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 RNA5SP87-201ENST00000384155 118 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 Y_RNA.460-201ENST00000384255 102 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 RNU4-26P-201ENST00000410270 107 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 RN7SKP159-201ENST00000410657 292 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 FTH1P6-201ENST00000430768 320 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AL359265.2-201ENST00000434367 631 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 RN7SL432P-201ENST00000484057 298 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC007686.1-201ENST00000488511 463 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 RPS15AP36-201ENST00000492022 382 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC026427.2-201ENST00000506228 536 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC008694.2-201ENST00000517591 306 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC100770.1-201ENST00000532310 322 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC018630.1-201ENST00000541376 925 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 PSMA3P-201ENST00000555485 635 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 MIR3934-201ENST00000579806 107 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 MIR4293-201ENST00000584305 78 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC044792.1-201ENST00000593294 196 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC012443.1-201ENST00000605605 231 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AC106871.1-201ENST00000568324 3102 ntBASIC4.02□□□□□ -1.77
VSX1Q9NZR4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX1Q9NZR4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 ASNSP3-201ENST00000451989 1306 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 RNA5SP307-201ENST00000362863 116 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 Y_RNA.529-201ENST00000384586 119 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 MIR514A2-201ENST00000385131 88 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 MIR514A3-201ENST00000385132 88 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 MIR298-201ENST00000401212 88 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 RN7SKP177-201ENST00000410567 355 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 RPL21P24-201ENST00000413752 448 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 RPL23AP43-201ENST00000446445 471 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 CEACAMP6-201ENST00000452007 574 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 MTND3P16-201ENST00000452205 344 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC092324.1-201ENST00000468671 324 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AP000926.1-201ENST00000479573 241 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC026801.2-201ENST00000515352 425 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 Y_RNA.675-201ENST00000516389 149 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 RN7SKP256-201ENST00000517201 314 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC023050.3-201ENST00000541142 333 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC005668.1-201ENST00000571142 476 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC174048.1-201ENST00000603389 144 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 AC103710.2-202ENST00000641454 2853 ntBASIC4.01□□□□□ -1.77
VSX1Q9NZR4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
VSX1Q9NZR4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4□□□□□ -1.77
VSX1Q9NZR4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4□□□□□ -1.77
VSX1Q9NZR4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 MTND5P3-201ENST00000438536 1800 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms